y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi2g11850.1 |
Family | CE8 |
Protein Properties | Length: 562 Molecular Weight: 59714.2 Isoelectric Point: 7.6484 |
Chromosome | Chromosome/Scaffold: 2 Start: 10158802 End: 10161072 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 247 | 544 | 0 |
VTVDQSGAGNYTTVGEAVAAAPSNLGGTSGYFVIRVAAGVYEENVVVPKNKKYVMMVGDGIGQTVITGNRSVVDGWTTFNSATFAVVGQGFVAVNMTFRN TAGPAKHQAVALRCGADLSTFYQCSFEGYQDTLYTHSLRQFYRACDVYGTVDYVFGNAAVVFQDCTLHNRLPMAGQSNTVTAQGRSDPNQNTGTTIQGCS IVAAPELAANTAFATANYLGRPWKLYSRTVIMQSAVAGLVEPAGWMPWDGDFALSTLYYAEYDNSGPGSDTSRRVNWPGYHVLNSTADAGNFTVANMV |
Full Sequence |
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Protein Sequence Length: 562 Download |
MGASFHTTAT LCAVLLLSSF LHPARCDDPQ PPPATPVPPS TACNETTDPA FCRSVLPSNG 60 TSNLYTYGRF SAARSLSNAN RFLALVNRYL ARGGLSSAAI AALQDCQLLS GLNIDFLSTA 120 GATLNTTTNN NTLLDPQAED VHTLLSAILT NQQTCADGLQ SAAATAWYMR GGLAAPMADS 180 TKLYSVSLSL FTRAWVVQRP RRPKVRKPTT SKPPRHGRGL FDATDAEMVR RMAIEGPAAT 240 VPVFGAVTVD QSGAGNYTTV GEAVAAAPSN LGGTSGYFVI RVAAGVYEEN VVVPKNKKYV 300 MMVGDGIGQT VITGNRSVVD GWTTFNSATF AVVGQGFVAV NMTFRNTAGP AKHQAVALRC 360 GADLSTFYQC SFEGYQDTLY THSLRQFYRA CDVYGTVDYV FGNAAVVFQD CTLHNRLPMA 420 GQSNTVTAQG RSDPNQNTGT TIQGCSIVAA PELAANTAFA TANYLGRPWK LYSRTVIMQS 480 AVAGLVEPAG WMPWDGDFAL STLYYAEYDN SGPGSDTSRR VNWPGYHVLN STADAGNFTV 540 ANMVLGDFWL PQTGVPFTTG L* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 2.0e-144 | 41 | 557 | 524 | + pectinesterase | ||
PLN02301 | PLN02301 | 4.0e-149 | 101 | 561 | 462 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 1 | 561 | 577 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 40 | 561 | 549 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 247 | 547 | 301 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY73715.1 | 0 | 40 | 561 | 38 | 518 | hypothetical protein OsI_01593 [Oryza sativa Indica Group] |
GenBank | EAZ11620.1 | 0 | 40 | 561 | 38 | 530 | hypothetical protein OsJ_01484 [Oryza sativa Japonica Group] |
RefSeq | NP_001042865.1 | 0 | 40 | 561 | 38 | 556 | Os01g0311800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002440965.1 | 0 | 33 | 561 | 27 | 571 | hypothetical protein SORBIDRAFT_09g017920 [Sorghum bicolor] |
RefSeq | XP_002457749.1 | 0 | 34 | 561 | 36 | 563 | hypothetical protein SORBIDRAFT_03g012820 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 247 | 561 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 243 | 561 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 4e-17 | 247 | 469 | 8 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 4e-17 | 247 | 469 | 8 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 4e-17 | 247 | 469 | 8 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |