y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10008203 |
Family | CE8 |
Protein Properties | Length: 544 Molecular Weight: 60452.8 Isoelectric Point: 9.6464 |
Chromosome | Chromosome/Scaffold: 157 Start: 16339 End: 18863 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 232 | 527 | 0 |
LIVAKDGTGNFSTISEAVAAAPNSSHTRFVIYIKSGAYFENVEVEKKKLRLMFIGDGIGKTVVKANRSVVDGWTTFRSATVAVVGNGFLAKGITIENSAG PSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYRDCDIYGTVDFIFGNAAVVLQNCNLYARKPNPNQKNIYTAQGREDPNQNTGIVLHNCKIAA AADLIPVKAQFKTYLGRPWKTYSRTVIMGSYIDDIVDPAGWLEWDGSFALSTLYYGEYMNRGPGSNTTRRVTWPGYRVINNSVEASQFTVGVFIQG |
Full Sequence |
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Protein Sequence Length: 544 Download |
MYNLTKLLAL LPISLFLLAT FHFLHHPISN PNTKPTKLPQ LHFYKHLASI NSACDGTLYP 60 DLCVSTLLSS FPAGHLTFSS KSRSIPKLIT ATLNRTMSEV RASSSNCSRI QRNIHSHLDR 120 VALAHCLELL HXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXRKVPG 180 VAEVEKSSGS DAARRLWSGF GGDVENDRFP TWLSRKDRRL LQAPVNETKF DLIVAKDGTG 240 NFSTISEAVA AAPNSSHTRF VIYIKSGAYF ENVEVEKKKL RLMFIGDGIG KTVVKANRSV 300 VDGWTTFRSA TVAVVGNGFL AKGITIENSA GPSKHQAVAL RSGADFSAFY QCSFVGYQDT 360 LYVHSLRQFY RDCDIYGTVD FIFGNAAVVL QNCNLYARKP NPNQKNIYTA QGREDPNQNT 420 GIVLHNCKIA AAADLIPVKA QFKTYLGRPW KTYSRTVIMG SYIDDIVDPA GWLEWDGSFA 480 LSTLYYGEYM NRGPGSNTTR RVTWPGYRVI NNSVEASQFT VGVFIQGSEW LNTTGIPFTS 540 GLS* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 9.0e-176 | 206 | 542 | 337 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 2.0e-179 | 218 | 542 | 330 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 231 | 528 | 298 | + Pectinesterase. | ||
PLN02933 | PLN02933 | 0 | 203 | 542 | 340 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACQ85264.1 | 0.000000001 | 40 | 130 | 45 | 131 | pectin methylesterase [Musa acuminata AAA Group] |
GenBank | ACQ85264.1 | 0 | 181 | 543 | 205 | 565 | pectin methylesterase [Musa acuminata AAA Group] |
RefSeq | XP_002301486.1 | 0 | 209 | 538 | 116 | 445 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523113.1 | 9e-16 | 37 | 130 | 36 | 124 | Pectinesterase-3 precursor, putative [Ricinus communis] |
RefSeq | XP_002523113.1 | 0 | 176 | 543 | 199 | 557 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 231 | 542 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 233 | 542 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 5e-27 | 228 | 450 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 5e-27 | 228 | 450 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 5e-27 | 228 | 450 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |