y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr1g088220.1 |
Family | CE8 |
Protein Properties | Length: 336 Molecular Weight: 36474.5 Isoelectric Point: 5.0551 |
Chromosome | Chromosome/Scaffold: 1 Start: 23897392 End: 23899176 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 22 | 318 | 0 |
VVVSQDGSGNFTAINDAVAAAPNNTVASDGYFFIFITKGVYQEYVSIPKNKKYLMMVGEGINQTVITGDHNVVDGFTTFNSATFAVVGQGFVAVNITFRN TAGPSKHQAVALRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNGAVVLQNCNIYPRLPLSGQFNSITAQGRTDPNQNTGTSIQNAT IKAADDLAPKVGTVQTYLGRPWKEYSRTVFMQSFTDSFINPAGWHEWNGDFALNTLYYAEYGNRGAGSSTVNRVTWPGYHVIGATDAANFTVSNFLS |
Full Sequence |
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Protein Sequence Length: 336 Download |
MGEKNISKGV TIENKDVVSD VVVVSQDGSG NFTAINDAVA AAPNNTVASD GYFFIFITKG 60 VYQEYVSIPK NKKYLMMVGE GINQTVITGD HNVVDGFTTF NSATFAVVGQ GFVAVNITFR 120 NTAGPSKHQA VALRSGADMS TFYSCSFEGY QDTLYTHSLR QFYRECDIYG TVDFIFGNGA 180 VVLQNCNIYP RLPLSGQFNS ITAQGRTDPN QNTGTSIQNA TIKAADDLAP KVGTVQTYLG 240 RPWKEYSRTV FMQSFTDSFI NPAGWHEWNG DFALNTLYYA EYGNRGAGSS TVNRVTWPGY 300 HVIGATDAAN FTVSNFLSGD DWIPQTGVPY SSGLI* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 9.0e-144 | 27 | 334 | 309 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-152 | 26 | 334 | 310 | + pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 3.0e-172 | 28 | 335 | 308 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
PLN02713 | PLN02713 | 0 | 26 | 335 | 310 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 26 | 320 | 296 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI36882.1 | 0 | 18 | 335 | 249 | 566 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002268492.1 | 0 | 18 | 334 | 239 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302726.1 | 0 | 8 | 335 | 230 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320332.1 | 0 | 11 | 335 | 236 | 560 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523112.1 | 0 | 17 | 335 | 248 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 22 | 334 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 23 | 334 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-24 | 21 | 324 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-24 | 21 | 324 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-24 | 21 | 324 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT739296 | 287 | 50 | 336 | 0 |
FS944812 | 290 | 28 | 317 | 0 |
EX028914 | 268 | 68 | 335 | 0 |
CX701458 | 231 | 106 | 336 | 0 |
DN497639 | 251 | 30 | 280 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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