y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.015G127700.1 |
Family | CE8 |
Protein Properties | Length: 518 Molecular Weight: 57615.7 Isoelectric Point: 9.9496 |
Chromosome | Chromosome/Scaffold: 15 Start: 13984794 End: 13987130 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 206 | 501 | 0 |
LVVAQDGSGNHRTIKAALDAAAKRSGSRRFVIRIKSGVYRENLDIGKKLKNIMLVGDGLRNTIITGSRSVGGGFTTFNSATVAVTGEGFIARGITFRNTA GPQNHQAVALRSGSDLSVFYRCGFEGYQDTLYVHSQRQFYKECYIYGTVDFIFGNAAVILQNCMIYARRPMDKQKNVVTAQGRTDPNQNTGISIHNSRVM ASSDLRPVLSSFKTYLGRPWKEYSRTVFLQTYLDSLVDPAGWLEWDGNFALNTLYYGEYRNSGPGASTRGRVKWRGYRVITSSTEASRFTVANFIA |
Full Sequence |
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Protein Sequence Length: 518 Download |
MATKLCLSLL FMCLCSLLSS SIASNDQIDY WCSKTPNPEP CKYFMKQNPK HFVPKQKSDF 60 RKMAIELAVQ RALNAQNHNK WLGPKCRNEK EKAAWADCLK LYEDTIAELN HTIDSNTKCT 120 QFDAQTWLST ALTNLETCKA GFKDLGVSDF VLPLMSNNVS KLIRNTLALK DNASSTLPQT 180 YKDGFPSWVK AGDRKLLQTS SPSPNLVVAQ DGSGNHRTIK AALDAAAKRS GSRRFVIRIK 240 SGVYRENLDI GKKLKNIMLV GDGLRNTIIT GSRSVGGGFT TFNSATVAVT GEGFIARGIT 300 FRNTAGPQNH QAVALRSGSD LSVFYRCGFE GYQDTLYVHS QRQFYKECYI YGTVDFIFGN 360 AAVILQNCMI YARRPMDKQK NVVTAQGRTD PNQNTGISIH NSRVMASSDL RPVLSSFKTY 420 LGRPWKEYSR TVFLQTYLDS LVDPAGWLEW DGNFALNTLY YGEYRNSGPG ASTRGRVKWR 480 GYRVITSSTE ASRFTVANFI AGRSWLPATG VPFYPGL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02916 | PLN02916 | 3.0e-173 | 94 | 517 | 443 | + pectinesterase family protein | ||
PLN02484 | PLN02484 | 2.0e-175 | 28 | 517 | 513 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02995 | PLN02995 | 0 | 28 | 517 | 508 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 205 | 502 | 298 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 90 | 517 | 436 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002265104.1 | 0 | 29 | 517 | 5 | 494 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318285.1 | 0 | 1 | 517 | 1 | 520 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322399.1 | 0 | 1 | 517 | 1 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322401.1 | 0 | 1 | 517 | 1 | 517 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510940.1 | 0 | 63 | 517 | 1 | 455 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 198 | 517 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 205 | 517 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-28 | 205 | 472 | 5 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-28 | 205 | 472 | 5 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-28 | 205 | 472 | 5 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |