y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00039009m |
Family | CE8 |
Protein Properties | Length: 557 Molecular Weight: 56245.1 Isoelectric Point: 8.614 |
Chromosome | Chromosome/Scaffold: 057509 Start: 563 End: 2966 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 253 | 540 | 0 |
AVVALDGSGTHRSINEAIAAVTAAANGGTGVGGGGGRKVIHVKAGRYEESVSISSKQKNVMLMGDGKGKTVIVGHKSAADGYTTYVTATVAAMGSGFIAK GLTIVNSAGPGNGQAVALRVGGDLSVVYQCAIQAYQDTLYVHSNRQFYAEDDIAGTVNFIFGNSAVVIQNCNIQARRPSPGQKDTVTAQGRTDLNQNTGI SIHKCRITGAPDLGGTPLYLGRPCQKYSRTVVMESFLDRSISPAGWLEWSGHNTGPGAGTRKRVTWTGVHTSLSRSDATRFTVANFIM |
Full Sequence |
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Protein Sequence Length: 557 Download |
MHGLLRPWSR AIATVLLGLS TEASLVAAGT QDEAAAPRPG GNVAVDASRI AVSAAAAAPW 60 GVNISAICLS TPYPGACETA LSSPASGSAR DPFAASAQFA MARAASARAL ARKLSGASSS 120 SSRCLRGAPP TGVEDCAELL GISLDQLGDA LAAAAGDADG VTTWLSAALT NQGTCVDSLA 180 ADPDSAGRDA VRARVSALAQ FIATALALHG NKLNAYDARG GGSTPPPGAP TPPAAFPSWA 240 PAGATSGGVT IDAVVALDGS GTHRSINEAI AAVTAAANGG TGVGGGGGRK VIHVKAGRYE 300 ESVSISSKQK NVMLMGDGKG KTVIVGHKSA ADGYTTYVTA TVAAMGSGFI AKGLTIVNSA 360 GPGNGQAVAL RVGGDLSVVY QCAIQAYQDT LYVHSNRQFY AEDDIAGTVN FIFGNSAVVI 420 QNCNIQARRP SPGQKDTVTA QGRTDLNQNT GISIHKCRIT GAPDLGGTPL YLGRPCQKYS 480 RTVVMESFLD RSISPAGWLE WSGHNTGPGA GTRKRVTWTG VHTSLSRSDA TRFTVANFIM 540 GDSWLGGTGV TYTSGL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 1.0e-107 | 291 | 556 | 282 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 7.0e-111 | 134 | 556 | 452 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 4.0e-113 | 132 | 556 | 456 | + pectinesterase/pectinesterase inhibitor | ||
PLN02170 | PLN02170 | 2.0e-127 | 133 | 556 | 446 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 9.0e-139 | 252 | 542 | 307 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD19539.1 | 0 | 8 | 556 | 15 | 571 | putative pectinesterase [Oryza sativa Japonica Group] |
RefSeq | NP_001048322.1 | 0 | 8 | 556 | 25 | 581 | Os02g0783000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148248.1 | 0 | 42 | 556 | 54 | 578 | pectinesterase-2 [Zea mays] |
RefSeq | XP_002449226.1 | 0 | 11 | 541 | 2 | 569 | hypothetical protein SORBIDRAFT_05g006610 [Sorghum bicolor] |
RefSeq | XP_002454668.1 | 0 | 63 | 556 | 56 | 575 | hypothetical protein SORBIDRAFT_04g035200 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 252 | 556 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 249 | 556 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 0.000000000000004 | 250 | 505 | 3 | 286 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.000000000000004 | 250 | 505 | 3 | 286 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 0.000000000000004 | 250 | 505 | 3 | 286 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |