y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G160000.1 |
Family | CE8 |
Protein Properties | Length: 529 Molecular Weight: 57712.9 Isoelectric Point: 8.5955 |
Chromosome | Chromosome/Scaffold: 05 Start: 46003064 End: 46005274 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 221 | 512 | 0 |
DIVVAQDGSGNFKTITEAVAAAGGGKRTVIYVKAGVYKENVDIKRSAKNIMLVGDGIDATIVTGSKNAQTTTTFRSATVGVSGDGFIARDMTFENTAGPQ KHQAVAFRSGSDFSVFYRCSFKGYQDTLYVYSQRQFYRDCDIYGTVDFIFGDAVAVFQSCNIYIRRPMSGQKNTVTAQGRTDQNENTGIVIHNSRVTASS DMKAVQGSFKSYLGRPWQKYSRTVFMRSTLDGLIDREGWLPWSGNFALSTLYYAEYMNTGAGADTSGRVKWGGYHVIGATEAAKFTVGNFLA |
Full Sequence |
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Protein Sequence Length: 529 Download |
MDKLVVILTF FLTHFFIFPL GNFVNGATIT SCTQTPYPDV CNFYMGNSLN VAANLDQTQF 60 SFRDVAIQVT LSQAVQAHQL VSSMDSSSFD QRAKLAWNDC VELYEDTIHH LNLSKTTNNQ 120 IDSQTWLSAA IANQQTCQNG FIDFNLASHL QTLPSMLGNI TKLISNSLAI NKATTVTSST 180 SHSNFAKQVA NRRLLSDGFP AWLSVADRKL LQTTGAPPKA DIVVAQDGSG NFKTITEAVA 240 AAGGGKRTVI YVKAGVYKEN VDIKRSAKNI MLVGDGIDAT IVTGSKNAQT TTTFRSATVG 300 VSGDGFIARD MTFENTAGPQ KHQAVAFRSG SDFSVFYRCS FKGYQDTLYV YSQRQFYRDC 360 DIYGTVDFIF GDAVAVFQSC NIYIRRPMSG QKNTVTAQGR TDQNENTGIV IHNSRVTASS 420 DMKAVQGSFK SYLGRPWQKY SRTVFMRSTL DGLIDREGWL PWSGNFALST LYYAEYMNTG 480 AGADTSGRVK WGGYHVIGAT EAAKFTVGNF LAGNSWIPGT GVPFDVGL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 2.0e-170 | 31 | 528 | 516 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 8.0e-171 | 19 | 528 | 546 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 8.0e-174 | 67 | 528 | 472 | + pectinesterase/pectinesterase inhibitor | ||
PLN02916 | PLN02916 | 3.0e-175 | 86 | 528 | 455 | + pectinesterase family protein | ||
pfam01095 | Pectinesterase | 0 | 221 | 514 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN77092.1 | 0 | 4 | 528 | 1 | 507 | hypothetical protein [Vitis vinifera] |
EMBL | CAN83663.1 | 0 | 32 | 528 | 28 | 512 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002265599.1 | 0 | 32 | 528 | 28 | 512 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002314796.1 | 0 | 1 | 528 | 1 | 531 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527782.1 | 0 | 1 | 528 | 1 | 529 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 221 | 528 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 220 | 528 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-25 | 232 | 518 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-25 | 232 | 518 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-25 | 232 | 518 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |