y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10009110 |
Family | CE8 |
Protein Properties | Length: 519 Molecular Weight: 56336 Isoelectric Point: 7.2647 |
Chromosome | Chromosome/Scaffold: 1536 Start: 16508 End: 18489 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 201 | 503 | 0 |
IVVAQDGTGHYGTISEAVAASVKVRKNAAAMGGKRFVIYVKKGVYRESVEIKKSMKNVMMIGDGIDETVVSNSNSVRGGFTTYRSATFAVSGAGFIAKDM TFENTAEPQNHQAVALRSSSDLSVFYRCSFKGYQDTLYVHSQRQFYRDCDIYGTVDFIFGDASVVLQSCNIYVRRPMSHQKNTVTAQGRTDPNENTGIVI QSSRITEAADLAQVQGSFETYLGRPWKQYSRTLVIKSDVDGFINPAGWLPWNGEFALRTLYYGEYMNSGIGGRTERRVSWPGFHVIRSATEAGKFTVGNF LNG |
Full Sequence |
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Protein Sequence Length: 519 Download |
MAIGQSAADT QASDLPRQSS IKETIRHAMQ VRQQLMMSSS LSSNSKIHSS SLVVDQDRED 60 PLRIAAAKSA MVDCAELYDD TLDHLNLSLG STVPSDTVTW LSAAVANKET CLNGFRDLNV 120 TSSPASSSLL PRVMSQFSQS LSNALAVNSQ AAAGDGGGRR KLLSTAAEEG EGRRFPSWVA 180 DGDRKLLEEL EGSGRPEAEH IVVAQDGTGH YGTISEAVAA SVKVRKNAAA MGGKRFVIYV 240 KKGVYRESVE IKKSMKNVMM IGDGIDETVV SNSNSVRGGF TTYRSATFAV SGAGFIAKDM 300 TFENTAEPQN HQAVALRSSS DLSVFYRCSF KGYQDTLYVH SQRQFYRDCD IYGTVDFIFG 360 DASVVLQSCN IYVRRPMSHQ KNTVTAQGRT DPNENTGIVI QSSRITEAAD LAQVQGSFET 420 YLGRPWKQYS RTLVIKSDVD GFINPAGWLP WNGEFALRTL YYGEYMNSGI GGRTERRVSW 480 PGFHVIRSAT EAGKFTVGNF LNGDAWIPSS GVPYASGL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02916 | PLN02916 | 5.0e-168 | 70 | 518 | 452 | + pectinesterase family protein | ||
PLN02301 | PLN02301 | 1.0e-169 | 68 | 518 | 457 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 7.0e-170 | 57 | 518 | 488 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 7.0e-171 | 69 | 518 | 464 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 200 | 504 | 305 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN77092.1 | 0 | 68 | 518 | 90 | 507 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_173733.1 | 0 | 33 | 518 | 69 | 554 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002314796.1 | 0 | 67 | 518 | 88 | 531 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511679.1 | 0 | 29 | 518 | 61 | 514 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002527782.1 | 0 | 67 | 518 | 91 | 529 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 200 | 518 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 202 | 518 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-20 | 211 | 426 | 18 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-20 | 211 | 426 | 18 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-20 | 211 | 426 | 18 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EC939603 | 288 | 232 | 519 | 0 |
HO778758 | 469 | 58 | 518 | 0 |
HO852920 | 430 | 96 | 519 | 0 |
EE076581 | 282 | 201 | 482 | 0 |
EE258331 | 244 | 243 | 486 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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