y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10007942m |
Family | CE8 |
Protein Properties | Length: 541 Molecular Weight: 59402.4 Isoelectric Point: 4.9879 |
Chromosome | Chromosome/Scaffold: 1 Start: 24964826 End: 24966867 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 231 | 524 | 0 |
LTVAADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLRGGGKDSTIITGSRSVGDGWTTFRSATVAVSGDGFLARDLTIENKAG PEKHQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRMPLPGQFTVITAQSKDDPNENTGISIQNCSILA TEDLYANSASVKSYLGRPWRIYSTTVFLESYIDDFIEPAGWTEWSGDQGLDTLYYGEFNNYGPGSGTDNRVTWPGYHVMDENDAYEFTVSQLIN |
Full Sequence |
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Protein Sequence Length: 541 Download |
MATSSFLKLT LLLFTISIYI TATLSTPSTT SLHTNISSIS NFCKSTPHPD ACFESLKLSI 60 SINISPNIIN FLLQTLQMAI SEAGKVTNLL SGAGSSNIVE KQRGTIQDCK ELHQITLSAL 120 QKSLPKIRAA HDAKTLSDAR AYLSAALTNK NTCLESLNSA SGSLKQPLVN SITSTYRYVS 180 NSLSALPKPA TTEGNKHRRR LMGFPEWLSR KDRRILQSSD DDNEYDQSQV LTVAADGTGD 240 FTTITDAINF APNNSDDRVV INIKQGVYEE NLEIPSYKTN IFLRGGGKDS TIITGSRSVG 300 DGWTTFRSAT VAVSGDGFLA RDLTIENKAG PEKHQAVALR VNADFAALFR CSFSGYQDTL 360 YVHSFRQFYR ECDVYGTIDY IFGNAAVVLQ ACNIVSRMPL PGQFTVITAQ SKDDPNENTG 420 ISIQNCSILA TEDLYANSAS VKSYLGRPWR IYSTTVFLES YIDDFIEPAG WTEWSGDQGL 480 DTLYYGEFNN YGPGSGTDNR VTWPGYHVMD ENDAYEFTVS QLINGQEWLD STSIPYQDGI 540 * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 2.0e-156 | 38 | 540 | 518 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-164 | 39 | 540 | 511 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 2.0e-171 | 38 | 540 | 543 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02416 | PLN02416 | 0 | 35 | 540 | 507 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 232 | 525 | 295 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH56489.1 | 0 | 30 | 540 | 36 | 543 | pectin methylesterase 1 [Prunus persica] |
RefSeq | NP_180212.1 | 0 | 31 | 540 | 29 | 547 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002273535.1 | 0 | 3 | 540 | 2 | 529 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326320.1 | 0 | 18 | 540 | 16 | 539 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516192.1 | 0 | 32 | 540 | 37 | 543 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 233 | 540 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 231 | 540 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 7e-27 | 241 | 495 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 7e-27 | 241 | 495 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 8e-27 | 241 | 495 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |