y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10023535m |
Family | CE8 |
Protein Properties | Length: 573 Molecular Weight: 62304.2 Isoelectric Point: 4.9427 |
Chromosome | Chromosome/Scaffold: 3 Start: 37846062 End: 37848400 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 259 | 554 | 0 |
VTVAQDGSGNFSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYVSIPKNKINLLMIGDGINQTIITGNRSVVDGWTTFNSATFIVVAPNFVASSITFRN TAGPSKGQAVALRSGADFSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPLNGQFIAITAQGRTDPNQNTGTSIHNCT ITAAADLASSNQTVQPYLGRPWKEYSRTVYMQSFMDSLINPAGWHEWSGDFALATLYYAEYNNTGPGSDTTNRVTWPGYQVINATDAANFTVSNFL |
Full Sequence |
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Protein Sequence Length: 573 Download |
MASKLFFLKT SPILIALLLF AYPSCAAADV DPTAPVPPET ICMCTPNPSD CKSVLPAASP 60 NQTADTYTYC RLSIRKALTQ TQKFLNSVDN YLKSGSTLSI SAIRALEDCR LLADLNMDYL 120 STSYQTANTT SQILPTIQAD DVQALLSAIL TNQQTCFDGL QTSANSFESI NNGLSVPLLE 180 DIKLSSVLLA LFKKGWIGDQ KKIITSWQLS STQRLVGQNG RLPLVMSDRI RAIYESAVRG 240 RKLSSTGDGD QGVLVTDIVT VAQDGSGNFS TITDAINFAP NNTNVSNGYF LIYITAGVYQ 300 EYVSIPKNKI NLLMIGDGIN QTIITGNRSV VDGWTTFNSA TFIVVAPNFV ASSITFRNTA 360 GPSKGQAVAL RSGADFSTFY SCSFEGYQDT LYTHSLRQFY RECDIYGTVD FIFGNAAVVL 420 QNCNIYPRLP LNGQFIAITA QGRTDPNQNT GTSIHNCTIT AAADLASSNQ TVQPYLGRPW 480 KEYSRTVYMQ SFMDSLINPA GWHEWSGDFA LATLYYAEYN NTGPGSDTTN RVTWPGYQVI 540 NATDAANFTV SNFLLGDNWL PQTAVPYTGG LI* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 4.0e-151 | 41 | 571 | 538 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02416 | PLN02416 | 1.0e-155 | 40 | 571 | 539 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 1 | 572 | 575 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 42 | 572 | 542 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 259 | 557 | 300 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF42040.1 | 0 | 1 | 572 | 1 | 564 | pectin methylesterase 3 [Pyrus communis] |
RefSeq | XP_002268492.1 | 0 | 39 | 571 | 33 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302726.1 | 0 | 1 | 572 | 1 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320332.1 | 0 | 29 | 572 | 27 | 560 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523112.1 | 0 | 1 | 572 | 1 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 259 | 571 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 261 | 571 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 1e-22 | 258 | 561 | 7 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-22 | 258 | 561 | 7 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-22 | 258 | 561 | 7 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |