y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000621927 |
Family | CE8 |
Protein Properties | Length: 645 Molecular Weight: 71146.5 Isoelectric Point: 8.8107 |
Chromosome | Chromosome/Scaffold: 004699471 Start: 5565 End: 11401 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 337 | 629 | 0 |
XVVAKDGTGDFKTIQEAVDAVPKKSENRIVIHVKQGVYYENVLMDKSKWNVMMFGDGKTKTVVSGNLSSAGGTPTFSTATFAVTGKGFIVKDMRFINTAG AIKHQAVALRSGSDLSVYYRCSFDXFQDTLYAHSNRQFYRECDITGTIDFIFGNAAVVFQDCNIQPRQPMENQFNTITAXGKKDPNQNTGISIQNCRFXA LDSNLTAXTYLGRPWKDYSTTVIMQSEIGSFLNPSGWKEWVTNVDPPNTIFYAEYQNSGPGSGVDQRVKWAGYRPTLTDNEAVKFTVTSLIQG |
Full Sequence |
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Protein Sequence Length: 645 Download |
MLDSMRAFLR HRNHLKRTLD EGDRTESRNR VGGLETDQGD PVKPKAEKRR RRVSEIQKWT 60 PLKSFKGYGK VDVLEEQSFK RKNRKRLIIL SVSTVVLLAV IIGAVAGVLI HKRNNTSSST 120 PNSTPGTELT PAASLKAVCD VTQYPTSCFS SISALETSNT TDPEVIFKLS LQVAIHAAAK 180 LPGLPAKIGR NIVNDTRLEK VLAVCEGLFE DVVDRLNDSL TSMDVNQGEK LLSAAKINDI 240 KTWLSTTLTD QETCLDSLMD LNSTLVQEFK AAMQNSTEFS SNSLAIVAKI LSLLTNLNVP 300 VHRRLLGVGG SEMGFPSWVS PGDRRLLQDR NATVAQXVVA KDGTGDFKTI QEAVDAVPKK 360 SENRIVIHVK QGVYYENVLM DKSKWNVMMF GDGKTKTVVS GNLSSAGGTP TFSTATFAVT 420 GKGFIVKDMR FINTAGAIKH QAVALRSGSD LSVYYRCSFD XFQDTLYAHS NRQFYRECDI 480 TGTIDFIFGN AAVVFQDCNI QPRQPMENQF NTITAXGKKD PNQNTGISIQ NCRFXALDSN 540 LTAXTYLGRP WKDYSTTVIM QSEIGSFLNP SGWKEWVTNV DPPNTIFYAE YQNSGPGSGV 600 DQRVKWAGYR PTLTDNEAVK FTVTSLIQGD EWLPSTDVTF QSSL* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 9.0e-157 | 126 | 644 | 529 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 1.0e-157 | 137 | 644 | 540 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 61 | 644 | 591 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 65 | 644 | 585 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 338 | 630 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_175787.1 | 0 | 62 | 643 | 4 | 586 | ATPME1; pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | Q43111 | 0 | 62 | 644 | 4 | 581 | PME3_PHAVU RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
RefSeq | XP_002265217.1 | 0 | 62 | 644 | 4 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304256.1 | 0 | 62 | 644 | 4 | 588 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532945.1 | 0 | 62 | 644 | 4 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 334 | 644 | 2 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 338 | 644 | 10 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 5e-19 | 332 | 635 | 1 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 5e-19 | 332 | 635 | 1 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-18 | 332 | 635 | 1 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |