y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G247600.1 |
Family | CE8 |
Protein Properties | Length: 570 Molecular Weight: 62854.8 Isoelectric Point: 9.6155 |
Chromosome | Chromosome/Scaffold: 10 Start: 22132512 End: 22134453 |
Description | root hair specific 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 263 | 554 | 0 |
DVVVAKDGSGKYKRISDALKNVPEKSKKRYVIYVKKGIYFENVRVEKKQWNVMMIGDGMKETIVSASLNVVDGTPTFSTATFAVFGKGFIARDMGFRNTA GAIKHQAVALMSNADMSAFYRCSMDAFQDTLYAHANRQFYRECNIYGTVDFIFGNSAVVIQSSSILPRKPMQGQQNTITAQGKIDPNQNTGISIQNCTIW PYGDLSSVKTFLGRPWKNYSTTVFMRSMMGSLIDPAGWLPWTGNTAPPTIFYSEFENFGPGASTKNRVKWKGLKTITNKQASKFTVKAFIQG |
Full Sequence |
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Protein Sequence Length: 570 Download |
MSSLKAYGKL DEAEQARLEA RRRTRKRITI ISLSSILLVA IVVAAVVGTH ASSGNSKKGG 60 ADKSLSTSVK AVCDVTLYKD SCYNSLAPVA KPDQLQPEEL FKLAIQVAKN ELSKASQHFS 120 KDGGVLYNGV KDNMTITALE NCQELLSLAL DHLDNSLEAG HGVNVIDIVD DLRSWLSTSG 180 TCYQTCIDGL SETKLEATAH DYLKNSSELT SNSLAIITWI SKVASSVNIH RRLMNYEDQD 240 MPKWLHPEDR KLLQSSDLKK KADVVVAKDG SGKYKRISDA LKNVPEKSKK RYVIYVKKGI 300 YFENVRVEKK QWNVMMIGDG MKETIVSASL NVVDGTPTFS TATFAVFGKG FIARDMGFRN 360 TAGAIKHQAV ALMSNADMSA FYRCSMDAFQ DTLYAHANRQ FYRECNIYGT VDFIFGNSAV 420 VIQSSSILPR KPMQGQQNTI TAQGKIDPNQ NTGISIQNCT IWPYGDLSSV KTFLGRPWKN 480 YSTTVFMRSM MGSLIDPAGW LPWTGNTAPP TIFYSEFENF GPGASTKNRV KWKGLKTITN 540 KQASKFTVKA FIQGEEWLTG TGISYKPGL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 6.0e-160 | 128 | 569 | 447 | + pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 3.0e-162 | 52 | 569 | 544 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 0 | 4 | 569 | 567 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 3 | 565 | 584 | + pectinesterase | ||
pfam01095 | Pectinesterase | 0 | 270 | 555 | 291 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29155.1 | 0 | 1 | 569 | 1 | 561 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273396.1 | 0 | 1 | 569 | 4 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311918.1 | 0 | 1 | 569 | 1 | 568 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316458.1 | 0 | 1 | 569 | 1 | 569 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515781.1 | 0 | 1 | 569 | 1 | 573 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 263 | 569 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 262 | 569 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-17 | 263 | 547 | 5 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-17 | 263 | 547 | 5 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-17 | 263 | 547 | 5 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |