y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g048104m |
Family | GH5 |
Protein Properties | Length: 317 Molecular Weight: 36003 Isoelectric Point: 7.5747 |
Chromosome | Chromosome/Scaffold: 06646 Start: 1524 End: 3063 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 2 | 237 | 1.2e-26 |
LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYS GKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTI LKKPLVFSEFGKSCKEAGFSINVRDSFLNTIYMNIY |
Full Sequence |
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Protein Sequence Length: 317 Download |
GLDFVTSEAR KYGIRLILSL SNNYHDFGGR PQYVNWARAA GASVNSDDDF YTNAIVKGYY 60 KNHVKKVLTR INTITRIAYK DDPTIMAWEL INEPRCQADY SGKTLNNWVQ EMASYVKSID 120 NKHLLEIGLE GFYGDSIPDK KQFNPGYQVG TDFISNNMIK EIDFTTIHAY PDQWLPGKNY 180 YAQMQFVQKW LESHWTDSKT ILKKPLVFSE FGKSCKEAGF SINVRDSFLN TIYMNIYNLA 240 RNGGAIGGGM VWQLMAEGMQ PYFDGYEIVL SQNPSTRSVI AQQSNKMTAL AHILTCMDSL 300 KMLISLPKNI GMLDYE* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.004 | 34 | 212 | 190 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 6.0e-22 | 2 | 286 | 296 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN34823.1 | 0 | 1 | 292 | 117 | 408 | endo-beta-mannanase [Daucus carota] |
EMBL | CAC08208.1 | 0 | 1 | 293 | 118 | 409 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
RefSeq | XP_002270023.1 | 0 | 1 | 293 | 112 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272344.1 | 0 | 1 | 293 | 111 | 402 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272567.1 | 0 | 1 | 293 | 112 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 1 | 291 | 86 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 2.94273e-44 | 2 | 279 | 102 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 2.94273e-44 | 2 | 279 | 102 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 2.94273e-44 | 2 | 279 | 102 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 2.94273e-44 | 2 | 279 | 102 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV157927 | 288 | 3 | 290 | 0 |
EC937931 | 249 | 45 | 293 | 0 |
GT012761 | 260 | 11 | 270 | 0 |
DT734828 | 244 | 51 | 294 | 0 |
CF512833 | 301 | 1 | 301 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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