y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.119110.1 |
Family | GH5 |
Protein Properties | Length: 432 Molecular Weight: 49692.4 Isoelectric Point: 7.004 |
Chromosome | Chromosome/Scaffold: 00998 Start: 1010408 End: 1014254 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 51 | 377 | 3.9e-35 |
NGKAFYINGWNSYWFMDHSVEEYRKPRIRAMLQAARKMGLTVCRTWAFNDGGYNALQVSPGRFNERVFKALDHVIAESRQHGIRLLLSLVNNLQAYGGKT QYVKWAWQDGVGLSSSNDSFFYDPSIRIYFKNYLKTVLTRKNSITGIEYRNDPTIFGWELINEPRCMTDASGDTLQEWIEEMTAYIKSIDKKHLLTVGLE GFYGPNSPKKSTVNPEEWASRLGSDFIRNSEIQHVDFASVHIYPDHWFHDQDFEDELKFVSKWMLSHIEDGDKELKKPVMFTEFGLSDLNKGFTPAQRDS FYKTVYDVIYKSAKRNRSGAGSLAWQF |
Full Sequence |
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Protein Sequence Length: 432 Download |
MAGNGLFYPI LGFASCLAFI YLSFGDLRIG DTKVIPIVDF VERNGTQFML NGKAFYINGW 60 NSYWFMDHSV EEYRKPRIRA MLQAARKMGL TVCRTWAFND GGYNALQVSP GRFNERVFKA 120 LDHVIAESRQ HGIRLLLSLV NNLQAYGGKT QYVKWAWQDG VGLSSSNDSF FYDPSIRIYF 180 KNYLKTVLTR KNSITGIEYR NDPTIFGWEL INEPRCMTDA SGDTLQEWIE EMTAYIKSID 240 KKHLLTVGLE GFYGPNSPKK STVNPEEWAS RLGSDFIRNS EIQHVDFASV HIYPDHWFHD 300 QDFEDELKFV SKWMLSHIED GDKELKKPVM FTEFGLSDLN KGFTPAQRDS FYKTVYDVIY 360 KSAKRNRSGA GSLAWQFLVE GMEESNDDFG IVPWERSSIY QLIIEQSCRL ARIGGDTQQL 420 KALKYVCAQR W* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.001 | 13 | 359 | 376 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam12876 | Cellulase-like | 4.0e-5 | 198 | 293 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 2.0e-7 | 201 | 375 | 176 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 9.0e-32 | 48 | 395 | 348 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95966.1 | 0 | 1 | 430 | 5 | 434 | unknown [Populus trichocarpa] |
GenBank | ACN78665.1 | 0 | 1 | 430 | 14 | 442 | endo-beta-mannanase [Malus x domestica] |
EMBL | CBI21857.1 | 0 | 1 | 430 | 2 | 431 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_179660.2 | 0 | 2 | 430 | 5 | 432 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
RefSeq | XP_002273772.1 | 0 | 1 | 430 | 7 | 436 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 39 | 413 | 5 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 49 | 393 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 49 | 393 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 49 | 393 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 49 | 393 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |