y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.F01879.1 |
Family | GH5 |
Protein Properties | Length: 465 Molecular Weight: 52186.8 Isoelectric Point: 9.4139 |
Chromosome | Chromosome/Scaffold: 6 Start: 24700854 End: 24703227 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 81 | 403 | 1.2e-31 |
NGSPFYANGFNAYWLMFLASYPSQRAKVTSAFQEATSHGLSIARTWAFSDGGYMPLQSSPGSYNEQMFQGLDFVISEAKKFGIKLVLSLVDNYEALGGKK RYVEWARSQGQPIASDDDFFTNPVVKGYYKNHIRTVLTRRNSVTGIAYKDDPTIMAWELMNEVRCPSDPSGRTIQAWITEMASYVKSFDGNHLLEAGLEG FYAQSSAQKQQNNPSFLVGTDFIENNQIPGIDFATVHSYPDQWLSDPSVGNQISFLSNWVNTHIQDAQNVLHKPLLFAEFGISSKDSGYNQNERDQFFDT VYSAIYSSARGGGAAAGSMFWQL |
Full Sequence |
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Protein Sequence Length: 465 Download |
MPTPFTRQLK LLKRPKSSAG LHLENTPAFG RFRRARENMK HLRLLFFLAL VLVQERRSHF 60 AAKAEDGGGF VKTEGVHFML NGSPFYANGF NAYWLMFLAS YPSQRAKVTS AFQEATSHGL 120 SIARTWAFSD GGYMPLQSSP GSYNEQMFQG LDFVISEAKK FGIKLVLSLV DNYEALGGKK 180 RYVEWARSQG QPIASDDDFF TNPVVKGYYK NHIRTVLTRR NSVTGIAYKD DPTIMAWELM 240 NEVRCPSDPS GRTIQAWITE MASYVKSFDG NHLLEAGLEG FYAQSSAQKQ QNNPSFLVGT 300 DFIENNQIPG IDFATVHSYP DQWLSDPSVG NQISFLSNWV NTHIQDAQNV LHKPLLFAEF 360 GISSKDSGYN QNERDQFFDT VYSAIYSSAR GGGAAAGSMF WQLLTVGMDS YRDGYEIVLS 420 ESPSTASVIA QQSQKLNKIR KMYARLKNIE EWKKANNRRN DGGN* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 2.0e-5 | 127 | 381 | 268 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 6.0e-24 | 78 | 363 | 287 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV32547.1 | 0 | 39 | 464 | 1 | 431 | endo-1,4-beta-mannosidase protein 1 [Prunus persica] |
GenBank | ACU17987.1 | 0 | 59 | 464 | 18 | 418 | unknown [Glycine max] |
RefSeq | XP_002281804.1 | 0 | 45 | 459 | 6 | 418 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306881.1 | 0 | 39 | 462 | 1 | 419 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510418.1 | 0 | 45 | 459 | 6 | 417 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 70 | 439 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 79 | 434 | 21 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 79 | 434 | 21 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 79 | 434 | 21 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 79 | 434 | 21 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO798074 | 377 | 83 | 459 | 0 |
HO780470 | 365 | 95 | 459 | 0 |
DY296355 | 341 | 115 | 455 | 0 |
GR217808 | 341 | 28 | 368 | 0 |
HO798074 | 40 | 62 | 101 | 0.65 |
Sequence Alignments (This image is cropped. Click for full image.) |
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