y
Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s22_64V6.1 |
Family | GH5 |
Protein Properties | Length: 447 Molecular Weight: 49793.2 Isoelectric Point: 6.2953 |
Chromosome | Chromosome/Scaffold: 22 Start: 429820 End: 431843 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 77 | 419 | 1.2e-34 |
NGKALYVNGANIYWLMSMGTEESTRSVVTDVLTEAAAVGVTVVRTWAFADGSDYHPLQKTPGMFDESTFQGLDFAISEAKKHGIWLILSLVNNYADYGGK PQYVEWANTYAGTNLTSEDDFFSDATIRAWFKDYIRTIVTRVNTIGGVAYRDEPAIFAWELMNEPRCGSDPTGNVFQAWLEEMALYVKSLDTNHMLEVGL EGFYSSAVSLESVDRESSNPGTFATQYGVDFIRNQQISALDFASVHSYPDNWTPSLTEAEKRKFMVKWIQTHINDSETTLQKPVLFAEFGKSSRTSGYKE TVRIDAMRSMFNAVYDSAAKQGAAAGAMVWMLVTNSTKNTLAD |
Full Sequence |
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Protein Sequence Length: 447 Download |
MKILCWRFPA RIFSVSILLL VSLLLPLPPK KVGALRPKNE FSFTHHVHNT RHARRHVKAV 60 SSDSDFVNTR GHQFTVNGKA LYVNGANIYW LMSMGTEEST RSVVTDVLTE AAAVGVTVVR 120 TWAFADGSDY HPLQKTPGMF DESTFQGLDF AISEAKKHGI WLILSLVNNY ADYGGKPQYV 180 EWANTYAGTN LTSEDDFFSD ATIRAWFKDY IRTIVTRVNT IGGVAYRDEP AIFAWELMNE 240 PRCGSDPTGN VFQAWLEEMA LYVKSLDTNH MLEVGLEGFY SSAVSLESVD RESSNPGTFA 300 TQYGVDFIRN QQISALDFAS VHSYPDNWTP SLTEAEKRKF MVKWIQTHIN DSETTLQKPV 360 LFAEFGKSSR TSGYKETVRI DAMRSMFNAV YDSAAKQGAA AGAMVWMLVT NSTKNTLADG 420 FEIDLSSDLA IASLMQNQAS RMSSLS* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.0004 | 105 | 386 | 287 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 2.0e-27 | 86 | 374 | 294 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN78664.1 | 0 | 59 | 442 | 20 | 391 | endo-beta-mannanase [Malus x domestica] |
EMBL | CAC51690.3 | 0 | 66 | 446 | 26 | 397 | endo-beta-1,4-mannanase [Lactuca sativa] |
RefSeq | XP_001752613.1 | 0 | 64 | 445 | 45 | 427 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001756296.1 | 0 | 1 | 446 | 1 | 448 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001769553.1 | 0 | 66 | 445 | 104 | 486 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 62 | 446 | 2 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 76 | 440 | 22 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 76 | 440 | 22 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 76 | 440 | 22 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 76 | 440 | 22 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |