y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10025631m |
Family | GH5 |
Protein Properties | Length: 437 Molecular Weight: 50170.8 Isoelectric Point: 10.2488 |
Chromosome | Chromosome/Scaffold: 7 Start: 1800673 End: 1803725 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 45 | 339 | 3.7e-34 |
NLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY VNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFY GQSTPQRKRVNPNLDIGTDFIANNLIPGIDFATVHSYPDQWLSSSNDRYQLSFLNNWLDTHIQDAQHILRKPILLAEFGKSRKDPGYSTYQRDVM |
Full Sequence |
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Protein Sequence Length: 437 Download |
MRRLHLAFAI FLAFFIHRQS FNVLHVEAGD GFIRTRGSHF LLNGNLYFAN GFNAYWLMYV 60 ASDPSQRSKV STAFHEAASH GLTVARTWAF SDGGYRPLQR SPGSYNEQMF KGLDFVIAEA 120 RKYGIKLILS LANNYDSFGG KKQYVNWARS QGQFLTSDDD FFRNPVVKGY YKNLIKTVLN 180 RYNTFTGIHY KDDPTIMAWE LMNEPRCTSD PSGRTIQAWI TEMASYVKSI DRNHLLEAGL 240 EGFYGQSTPQ RKRVNPNLDI GTDFIANNLI PGIDFATVHS YPDQWLSSSN DRYQLSFLNN 300 WLDTHIQDAQ HILRKPILLA EFGKSRKDPG YSTYQRDVMF NTVYYKIYSS AKRGGAAAGG 360 LFWQLLTEGM DAFRDGYEIV LSQIPSTANV ITQQAHKLYQ IRKIFARMRN VERWKRSRGM 420 RRRQRQGGNR GRHIGN* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 5.0e-5 | 72 | 335 | 279 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 2.0e-26 | 40 | 341 | 309 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV32548.1 | 0 | 17 | 436 | 15 | 433 | endo-1,4-beta-mannosidase protein 2 [Prunus persica] |
GenBank | ABY58035.1 | 0 | 17 | 436 | 15 | 433 | mannase [Prunus salicina] |
GenBank | ACN78662.1 | 0 | 5 | 436 | 3 | 433 | endo-beta-mannanase [Actinidia arguta] |
RefSeq | XP_002281804.1 | 0 | 7 | 436 | 5 | 433 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002327685.1 | 0 | 16 | 436 | 14 | 435 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 28 | 401 | 2 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 36 | 377 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 36 | 377 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 36 | 377 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 36 | 377 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |