y
Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si001340m |
Family | GH5 |
Protein Properties | Length: 465 Molecular Weight: 51496.1 Isoelectric Point: 7.1779 |
Chromosome | Chromosome/Scaffold: 5 Start: 36713552 End: 36716787 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH5 | 78 | 412 | 7.8e-35 |
DGQPFYPNGWNSYWLMDQAVEPRSRDRVSRMFRAAAEMGLTVCRSWAFNDGAYNALQVSPGHFDTRVFKALDWVVVEAGRHGVRLILSLANNLEAYGGKT QYVRWAWEEGVGLSASNDSFFYDPAIRDYFKAYLKTLLTRKNHLTGVEYRDDPTILAWELMNEPRCTTDPSGDTLQRWIEEMAAYVKSIDKKHLLTVGTE GFYGPTSPESKRDVNPGVWKDNNYGSDFIRNAKIPDIDFASIHLYPDTWLQKQHATVNEKLQFVKRWVSSHIEDGDKELNKPVLTTEFGLSHRAQGFDPS HRDVFYKAIYDIVYASASRGGAGAAALVWQLAPEG |
Full Sequence |
---|
Protein Sequence Length: 465 Download |
MAVGGGLALY HVLGVATCVA LLYFTFGEVD LRHISLSSLP ASGFGFGSGA GPSSSSSRAA 60 AAVTAPFVER RGAQLFLDGQ PFYPNGWNSY WLMDQAVEPR SRDRVSRMFR AAAEMGLTVC 120 RSWAFNDGAY NALQVSPGHF DTRVFKALDW VVVEAGRHGV RLILSLANNL EAYGGKTQYV 180 RWAWEEGVGL SASNDSFFYD PAIRDYFKAY LKTLLTRKNH LTGVEYRDDP TILAWELMNE 240 PRCTTDPSGD TLQRWIEEMA AYVKSIDKKH LLTVGTEGFY GPTSPESKRD VNPGVWKDNN 300 YGSDFIRNAK IPDIDFASIH LYPDTWLQKQ HATVNEKLQF VKRWVSSHIE DGDKELNKPV 360 LTTEFGLSHR AQGFDPSHRD VFYKAIYDIV YASASRGGAG AAALVWQLAP EGMEEFHDDY 420 SVVPSEHPSL RRLIKKQSCR LAKLRPGVGE EAKRVLAACA AGSS* 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3934 | COG3934 | 0.005 | 188 | 368 | 194 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
pfam12876 | Cellulase-like | 0.001 | 225 | 276 | 61 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 1.0e-8 | 194 | 391 | 201 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 1.0e-29 | 145 | 426 | 283 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY75800.1 | 0 | 1 | 461 | 1 | 445 | hypothetical protein OsI_03716 [Oryza sativa Indica Group] |
RefSeq | NP_001044230.1 | 0 | 1 | 456 | 1 | 440 | Os01g0746700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130322.1 | 0 | 1 | 464 | 1 | 453 | hypothetical protein LOC100191416 [Zea mays] |
Swiss-Prot | Q0JJD4 | 0 | 1 | 461 | 1 | 445 | MAN2_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 2; AltName: Full=Beta-mannanase 2; AltName: Full=Endo-beta-1,4-mannanase 2; AltName: Full=OsMAN2; Flags: Precursor |
RefSeq | XP_002458478.1 | 0 | 1 | 464 | 1 | 461 | hypothetical protein SORBIDRAFT_03g034420 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 67 | 444 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 71 | 424 | 17 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 71 | 424 | 17 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 71 | 424 | 17 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 71 | 424 | 17 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |