y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_57.52 |
Family | GH5 |
Protein Properties | Length: 294 Molecular Weight: 33271.1 Isoelectric Point: 5.0362 |
Chromosome | Chromosome/Scaffold: 57 Start: 817997 End: 819871 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 6 | 256 | 1.7e-28 |
GLDFVVAEAGKYKVYLILSLVNNFDDFGGRKRYVQWANGSDPDEFYTNNRVKEFYKNHVQAVLTRKNTITGVTYKDDPTIFAWELMNEPRCNDPSGSKIQ EWVKEMAAHVKSIDNDHLLEIGLEGFYGESVPQRKQSNPNTAITGTDFISNNQIPQIDFATLHIYPEQWLPWEKASESEQNAFVDNWIKVHTQDCNSVIR KPVVIGEFGRSSKLSGFTLEKRNMYFEKVYTAVYNSASTGGSCAGAIFWQL |
Full Sequence |
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Protein Sequence Length: 294 Download |
MNLDQGLDFV VAEAGKYKVY LILSLVNNFD DFGGRKRYVQ WANGSDPDEF YTNNRVKEFY 60 KNHVQAVLTR KNTITGVTYK DDPTIFAWEL MNEPRCNDPS GSKIQEWVKE MAAHVKSIDN 120 DHLLEIGLEG FYGESVPQRK QSNPNTAITG TDFISNNQIP QIDFATLHIY PEQWLPWEKA 180 SESEQNAFVD NWIKVHTQDC NSVIRKPVVI GEFGRSSKLS GFTLEKRNMY FEKVYTAVYN 240 SASTGGSCAG AIFWQLMTRG TENQGDGYQV VLEESSSTAN IITQQSINLS HLY* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.0006 | 78 | 170 | 103 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 1.0e-5 | 46 | 232 | 194 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 4.0e-25 | 7 | 268 | 263 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF69949.1 | 0 | 5 | 292 | 104 | 393 | (1-4)-beta-mannan endohydrolase (mannan endo-1,4-beta-mannosidase), putative [Musa acuminata] |
GenBank | ABG88068.1 | 0 | 5 | 292 | 120 | 409 | endo-1,4-beta-mannanase [Glycine max] |
RefSeq | NP_171733.2 | 0 | 5 | 292 | 110 | 400 | glycosyl hydrolase family protein 5 / cellulase family protein / (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
RefSeq | XP_002302695.1 | 0 | 5 | 289 | 116 | 400 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515142.1 | 0 | 2 | 292 | 112 | 403 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 5 | 292 | 85 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 1.96182e-44 | 7 | 286 | 102 | 380 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 1.96182e-44 | 7 | 286 | 102 | 380 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 1.96182e-44 | 7 | 286 | 102 | 380 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 1.96182e-44 | 7 | 286 | 102 | 380 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX281578 | 281 | 14 | 294 | 0 |
EX302501 | 207 | 5 | 211 | 0 |
EX277185 | 206 | 89 | 294 | 0 |
AM904313 | 186 | 16 | 201 | 0 |
EX302501 | 33 | 211 | 242 | 0.012 |
Sequence Alignments (This image is cropped. Click for full image.) |
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