y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os01g47400.2 |
Family | GH5 |
Protein Properties | Length: 404 Molecular Weight: 43759.4 Isoelectric Point: 9.517 |
Chromosome | Chromosome/Scaffold: 1 Start: 27081818 End: 27085680 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 48 | 309 | 7.9e-28 |
DGNPYYANGFNAYWLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFSDGGGGNALQLSPGNYNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGR KQYVNWARAQGQGIGSDDEFFTNPVVKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSDLSGRTVQSWITEMAAHVKSIDRNHMLEVGLE GFYGASSPSRIAAVNPSGYQLGTDFIANNQVPGIDFATVHSYPDQWLSGKDDQAQLGFMGRW |
Full Sequence |
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Protein Sequence Length: 404 Download |
MRLLGAHRAA LLVLACVVVV VIHGLGEAEA LGGGGGFVRA QGTRFVLDGN PYYANGFNAY 60 WLMLLAADPS QRGKVSAALG EAAGHGLTVA RTWAFSDGGG GNALQLSPGN YNENTFKGLD 120 FVLSEARKYG IKVILSLVDN YDSFGGRKQY VNWARAQGQG IGSDDEFFTN PVVKGFYKNH 180 VKTVLTRKNT ITGVAYRDDP TILAWELMNE PRCQSDLSGR TVQSWITEMA AHVKSIDRNH 240 MLEVGLEGFY GASSPSRIAA VNPSGYQLGT DFIANNQVPG IDFATVHSYP DQWLSGKDDQ 300 AQLGFMGRWL DAHIRDALYG TVYAKIYESA RRGGATVGGL FWQLLVPGMD SYRDGYEVVF 360 GETPSTTGVI TTNSRRLRFL SKAFARARQA QPARGKGRHN GGK* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.007 | 85 | 228 | 172 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG2730 | BglC | 0.003 | 91 | 212 | 122 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
COG3934 | COG3934 | 6.0e-20 | 77 | 317 | 242 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005488 | binding |
GO:0005623 | cell |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC71222.1 | 0 | 1 | 403 | 1 | 432 | hypothetical protein OsI_03157 [Oryza sativa Indica Group] |
RefSeq | NP_001043785.1 | 0 | 1 | 403 | 1 | 403 | Os01g0663300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001145882.1 | 0 | 22 | 391 | 16 | 413 | hypothetical protein LOC100279398 [Zea mays] |
Swiss-Prot | Q0JKM9 | 0 | 1 | 403 | 1 | 432 | MAN1_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 1; AltName: Full=Beta-mannanase 1; AltName: Full=Endo-beta-1,4-mannanase 1; AltName: Full=OsMAN1; Flags: Precursor |
RefSeq | XP_002456093.1 | 0 | 23 | 391 | 18 | 419 | hypothetical protein SORBIDRAFT_03g030340 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 37 | 381 | 6 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 1.96182e-44 | 46 | 317 | 21 | 296 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 1.96182e-44 | 46 | 317 | 21 | 296 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 1.96182e-44 | 46 | 317 | 21 | 296 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 1.96182e-44 | 46 | 317 | 21 | 296 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |