y
Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a020287m |
Family | GH5 |
Protein Properties | Length: 393 Molecular Weight: 44176.4 Isoelectric Point: 4.9946 |
Chromosome | Chromosome/Scaffold: 100 Start: 406226 End: 408217 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 25 | 329 | 2e-35 |
NGRSFYFNGFNSYWLMYMASDPSTKVKVTDTFAQASEYGMNLARTWAFSDGGYRALQTSPGLYNEDMFKGLDFVVSEAKKHGIYLLLTLVNNWEGFGGKR QYVQWAKDQGHYLNNDDDFFTNPIVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELINEPRCQSDLSGKAIQDWVAEMSAYVKSIDAKHLVEVGMEG FYGESMPEKKQNNPGYEVGTDFIANNLVPHVDFTTIHLYPDQWVPGSNDEVQAEFVHKWIQTHIEDSKLVIGKPIMVTEFGKSSRSSGYNVQARDNYFSS IFDSV |
Full Sequence |
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Protein Sequence Length: 393 Download |
MAYHGEAEVA REDFIGTRGS QFVMNGRSFY FNGFNSYWLM YMASDPSTKV KVTDTFAQAS 60 EYGMNLARTW AFSDGGYRAL QTSPGLYNED MFKGLDFVVS EAKKHGIYLL LTLVNNWEGF 120 GGKRQYVQWA KDQGHYLNND DDFFTNPIVK QYYKNHVKAV LTRINSITGV AYKDDPTIFA 180 WELINEPRCQ SDLSGKAIQD WVAEMSAYVK SIDAKHLVEV GMEGFYGESM PEKKQNNPGY 240 EVGTDFIANN LVPHVDFTTI HLYPDQWVPG SNDEVQAEFV HKWIQTHIED SKLVIGKPIM 300 VTEFGKSSRS SGYNVQARDN YFSSIFDSVY KCARTGGPCG GALFWQVMAQ GMGDWSDGYD 360 VVLEQSPSTV GVISQQSREI SSLNQINFAT SI* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.0001 | 54 | 220 | 172 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 1.0e-6 | 25 | 323 | 309 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 7.0e-31 | 22 | 360 | 351 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABG88068.1 | 0 | 14 | 383 | 41 | 409 | endo-1,4-beta-mannanase [Glycine max] |
EMBL | CAC08442.1 | 0 | 15 | 383 | 45 | 415 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
EMBL | CAC51690.3 | 0 | 12 | 384 | 24 | 397 | endo-beta-1,4-mannanase [Lactuca sativa] |
RefSeq | XP_002454605.1 | 0 | 2 | 387 | 25 | 411 | hypothetical protein SORBIDRAFT_04g034200 [Sorghum bicolor] |
RefSeq | XP_002515142.1 | 0 | 14 | 383 | 36 | 403 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 10 | 384 | 2 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 18 | 369 | 17 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 18 | 369 | 17 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 18 | 369 | 17 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 18 | 369 | 17 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK974111 | 371 | 14 | 383 | 0 |
HO794665 | 372 | 14 | 383 | 0 |
DW067489 | 301 | 45 | 344 | 0 |
JK987539 | 272 | 13 | 284 | 0 |
HO798074 | 357 | 30 | 386 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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