y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29983.m003185 |
Family | GH5 |
Protein Properties | Length: 431 Molecular Weight: 49856.5 Isoelectric Point: 6.2566 |
Chromosome | Chromosome/Scaffold: 29983 Start: 477216 End: 480246 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 51 | 377 | 3.9e-36 |
EGRPFYINGWNSFWLMDHSAEDDRKPRVSAMLQAGAKMGLTVCRTWAFNDGDYNALQVSPGKFDEGVFQALDYVIAEAGRHGVRLLLSLVNNLKAYGGKT QYVKWAWEEGIGLSSSNDSFFFDPTIKRYFKNYVKTILTRKNTITGIVYMNDPTIFAWELMNEPRCITDPSGDTLQEWIEEMSAFVKSIDNNHLLTVGLE GFYGPKNPKRLTVNPEEWASNLGSDFIRNSKVPDIDFASVHIYPDHWIQNQGLEEKLTFVYKWMQSHIEDGHYELNKPVFFTEYGFSNLNKDFRPDHRDR FYKTVLDVIYKSAKRKRAGAGALVWQL |
Full Sequence |
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Protein Sequence Length: 431 Download |
MVAANGLFYP ILGFASCVAF LYMSFGDFKL SYHQGPELAF VTRNGTQFMV EGRPFYINGW 60 NSFWLMDHSA EDDRKPRVSA MLQAGAKMGL TVCRTWAFND GDYNALQVSP GKFDEGVFQA 120 LDYVIAEAGR HGVRLLLSLV NNLKAYGGKT QYVKWAWEEG IGLSSSNDSF FFDPTIKRYF 180 KNYVKTILTR KNTITGIVYM NDPTIFAWEL MNEPRCITDP SGDTLQEWIE EMSAFVKSID 240 NNHLLTVGLE GFYGPKNPKR LTVNPEEWAS NLGSDFIRNS KVPDIDFASV HIYPDHWIQN 300 QGLEEKLTFV YKWMQSHIED GHYELNKPVF FTEYGFSNLN KDFRPDHRDR FYKTVLDVIY 360 KSAKRKRAGA GALVWQLFVE EMEEFNDDFG IVPWERPSTY RFLTEQSCKL ARIQGDPRPN 420 QYFKDLCLRR E 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 3.0e-10 | 52 | 346 | 300 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 1.0e-28 | 88 | 337 | 254 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95966.1 | 0 | 1 | 431 | 4 | 435 | unknown [Populus trichocarpa] |
GenBank | ACN78665.1 | 0 | 1 | 431 | 13 | 443 | endo-beta-mannanase [Malus x domestica] |
RefSeq | XP_002273772.1 | 0 | 1 | 430 | 6 | 436 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002330687.1 | 0 | 1 | 431 | 4 | 435 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517909.1 | 0 | 1 | 431 | 1 | 431 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 40 | 413 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 49 | 377 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 49 | 377 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 49 | 377 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 49 | 377 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |