y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT3G10900.1 |
Family | GH5 |
Protein Properties | Length: 409 Molecular Weight: 45376.5 Isoelectric Point: 7.1781 |
Chromosome | Chromosome/Scaffold: 3 Start: 3410252 End: 3412070 |
Description | OsMan01 - Endo-Beta-Mannanase, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 40 | 365 | 3.8e-32 |
NGKPFYANGFNAYWLAYEATDPTTRFKITNVFQNATSLGLTIARTWGFRDGAIYRALQTAPGSYDEQTFQGLDFVIAEAKRIGIKLIILLVNNWDDYGGK KQYVDWARSKGEVVSSNDDFYRNPVIKDFYKNHVKTVLNRVNTFTKVAYKDEPAIMAWQLMNEPRCGVDKSGKTLMDWINEMAPFVKSVDPNHLLSTGHE GFYGDSSPERKNSLNPVSANTVGADFIANHNIDAIDFASMHCGSDLWFQRLDQNSRLAFIKRWLEGHIEDAQNILKKPVILAEFGLGSDTPRYTLANRDG VFTTTYDIIYASAQKGGSAAGALFWE |
Full Sequence |
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Protein Sequence Length: 409 Download |
MKCLCFIVLL AIVIAQSYVG VEAAPSDGFV SRNGVQFILN GKPFYANGFN AYWLAYEATD 60 PTTRFKITNV FQNATSLGLT IARTWGFRDG AIYRALQTAP GSYDEQTFQG LDFVIAEAKR 120 IGIKLIILLV NNWDDYGGKK QYVDWARSKG EVVSSNDDFY RNPVIKDFYK NHVKTVLNRV 180 NTFTKVAYKD EPAIMAWQLM NEPRCGVDKS GKTLMDWINE MAPFVKSVDP NHLLSTGHEG 240 FYGDSSPERK NSLNPVSANT VGADFIANHN IDAIDFASMH CGSDLWFQRL DQNSRLAFIK 300 RWLEGHIEDA QNILKKPVIL AEFGLGSDTP RYTLANRDGV FTTTYDIIYA SAQKGGSAAG 360 ALFWEVISEG MSNFAGPSSI ILSDKSSTVN IISEHARKMG LLGETTRK* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.001 | 187 | 270 | 93 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 9.0e-7 | 100 | 327 | 232 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 8.0e-35 | 37 | 338 | 307 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0012505 | endomembrane system |
GO:0043169 | cation binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB01021.1 | 0 | 1 | 349 | 1 | 293 | (1-4)-beta-mannan endohydrolase-like protein [Arabidopsis thaliana] |
RefSeq | NP_187700.1 | 0 | 1 | 402 | 1 | 403 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
RefSeq | NP_187701.1 | 0 | 1 | 408 | 1 | 408 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
RefSeq | NP_189675.1 | 0 | 1 | 349 | 1 | 333 | (1-4)-beta-mannan endohydrolase family [Arabidopsis thaliana] |
RefSeq | NP_201447.1 | 0 | 1 | 402 | 1 | 400 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 26 | 402 | 3 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 28 | 397 | 13 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 28 | 397 | 13 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 28 | 397 | 13 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 28 | 397 | 13 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |