y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g012093m |
Family | GH5 |
Protein Properties | Length: 472 Molecular Weight: 53386.9 Isoelectric Point: 6.1146 |
Chromosome | Chromosome/Scaffold: 00036 Start: 184780 End: 187007 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 83 | 417 | 4e-36 |
NDQPFYVNGFNTYWLMVFAADQSTRGKVSELFHQASSAGLTVCRTWAFNDGQWRALQTSPSVYDEEVFKALDFVISEAKKYKIRLILSLTNNWDAYGGKA QYVKWGKAAGLNLTSDDEFFSHTTLKSYYKAHVKTVLNRVNTFTNLTYKNDPTIFAWELMNEPRCTSDPSGDTLQSWIQEMAVYVKSIDAKHLVEIGLEG FYGPSAPDRAKFNPNSYATQVGTDFIRNHQTLGVDFASVHIYADSWISQTISDAHLQFTKSWMEAHIEDAEKYLRMPVLFTEFGVSAKDTGYNTSFRDTL ISSVYKTLLNSTKKGGSGAGSLLWQLFPDGTDYMN |
Full Sequence |
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Protein Sequence Length: 472 Download |
MDYHKITLGS KSFFSLVIFT ILIENSSWTV FGVNGDWGFE STVEEIENHL SHASTHHGIY 60 DLQVREDDDW QMVQKQGNQF VVNDQPFYVN GFNTYWLMVF AADQSTRGKV SELFHQASSA 120 GLTVCRTWAF NDGQWRALQT SPSVYDEEVF KALDFVISEA KKYKIRLILS LTNNWDAYGG 180 KAQYVKWGKA AGLNLTSDDE FFSHTTLKSY YKAHVKTVLN RVNTFTNLTY KNDPTIFAWE 240 LMNEPRCTSD PSGDTLQSWI QEMAVYVKSI DAKHLVEIGL EGFYGPSAPD RAKFNPNSYA 300 TQVGTDFIRN HQTLGVDFAS VHIYADSWIS QTISDAHLQF TKSWMEAHIE DAEKYLRMPV 360 LFTEFGVSAK DTGYNTSFRD TLISSVYKTL LNSTKKGGSG AGSLLWQLFP DGTDYMNDGY 420 AIVLSKSPST SNIISLHSTR IATFNSLCST KCKWGCKKKT PLEEFLYHDD L* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.005 | 229 | 324 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
COG2730 | BglC | 0.0008 | 112 | 424 | 341 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 3.0e-6 | 83 | 377 | 303 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 2.0e-23 | 150 | 437 | 297 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19893.1 | 0 | 38 | 471 | 35 | 462 | unknown [Glycine max] |
EMBL | CBI18019.1 | 0 | 1 | 471 | 1 | 471 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309191.1 | 0 | 60 | 471 | 5 | 415 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323680.1 | 0 | 59 | 471 | 4 | 414 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528703.1 | 0 | 1 | 471 | 1 | 473 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 73 | 442 | 7 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 81 | 433 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 81 | 433 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 81 | 433 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 81 | 433 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK987915 | 295 | 66 | 360 | 0 |
DT747977 | 293 | 72 | 364 | 0 |
DY974976 | 272 | 66 | 337 | 0 |
EL450176 | 269 | 83 | 351 | 0 |
JG000902 | 245 | 212 | 456 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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