y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_86.73 |
Family | GH5 |
Protein Properties | Length: 441 Molecular Weight: 50193.5 Isoelectric Point: 6.0907 |
Chromosome | Chromosome/Scaffold: 86 Start: 940621 End: 942320 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 52 | 386 | 3.6e-37 |
NDKPFYVNGFNTYWLMVFAADESTRGKVTELFQHASSVGLTVCRTWAFNDGQWRALQKSPSVYDEQVFKALDFVVSEANKYKIRLILSLSNNWDAYGGKP QYVKWGKEAGLNLTSDDDFFSHPTLRSYYKAHVKTVLNRVNTFTNITYKDDPTIFAWELMNEPRCTSDPSGDKLQSWIQEMAVYVKSMDAKHLVEIGSEG FYGPSAPARTQFNPNTYATQIGTDFIRNHQVLGIDFASVHIYADSWLSQTITDDHLQFTKSWMEAHIEDAEKYLGMPVLFTEFGVSAKDPGYNSSFRDTL FNTVYKTLLNSTKKGGSGAGSLFWQLFPEGTDYMD |
Full Sequence |
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Protein Sequence Length: 441 Download |
MDTHKTKLVF SLTLFTILIR NVAITTSDGI YELEDDDAWQ MAQRKGNQFV VNDKPFYVNG 60 FNTYWLMVFA ADESTRGKVT ELFQHASSVG LTVCRTWAFN DGQWRALQKS PSVYDEQVFK 120 ALDFVVSEAN KYKIRLILSL SNNWDAYGGK PQYVKWGKEA GLNLTSDDDF FSHPTLRSYY 180 KAHVKTVLNR VNTFTNITYK DDPTIFAWEL MNEPRCTSDP SGDKLQSWIQ EMAVYVKSMD 240 AKHLVEIGSE GFYGPSAPAR TQFNPNTYAT QIGTDFIRNH QVLGIDFASV HIYADSWLSQ 300 TITDDHLQFT KSWMEAHIED AEKYLGMPVL FTEFGVSAKD PGYNSSFRDT LFNTVYKTLL 360 NSTKKGGSGA GSLFWQLFPE GTDYMDDGYA IILPKSPSTT NIISLQSTRL AIFNTMCSWH 420 CHWGCRKRTP LESFLYHDDL * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.0004 | 95 | 396 | 333 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 8.0e-6 | 154 | 340 | 200 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 9.0e-27 | 83 | 397 | 324 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19893.1 | 0 | 23 | 440 | 46 | 462 | unknown [Glycine max] |
EMBL | CBI18019.1 | 0 | 1 | 440 | 1 | 471 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273389.1 | 0 | 36 | 440 | 6 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323680.1 | 0 | 30 | 440 | 4 | 414 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528703.1 | 0 | 1 | 440 | 1 | 473 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 46 | 411 | 11 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 50 | 402 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 50 | 402 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 50 | 402 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 50 | 402 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK987915 | 295 | 35 | 329 | 0 |
DT747977 | 293 | 41 | 333 | 0 |
DY974976 | 278 | 29 | 306 | 0 |
EL450176 | 269 | 52 | 320 | 0 |
CV530822 | 312 | 1 | 289 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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