y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10020842m |
Family | GH5 |
Protein Properties | Length: 409 Molecular Weight: 45174.3 Isoelectric Point: 9.0482 |
Chromosome | Chromosome/Scaffold: 13 Start: 5943309 End: 5945248 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 42 | 367 | 1e-33 |
NGKPFYANGFNAYWLTYEATDPATRFKVTFALQNATIHGLTIARTWGFHDGGYRALQTAPGSYNELAFQGLDFAIAEAKRLGIKMIITFVNNYSDFGGRK QYVDWAKSKGQSVTSEDDFYTNPLVKQFYKNHVKTIVNRVNTFTKVAYKDEPTIMAWELMNEPQCKADPSGKTLTAWIREMAPYVKSLDSKHLLSTGLEG FYGDSSPKKKASLNPVAANVLGTDFIANHNIDAIDFASFHAYPDSWFPNIDEKSRSDYLRKWLEGHIEDAQNILKKPLILGEFGKPTTTPGYTQAQRDAV FNATFDIIYASAQKGGPAAGALFWHL |
Full Sequence |
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Protein Sequence Length: 409 Download |
MKCLCLIAFL AIMTAQSYSD LGVESASSDA FVSRKGLQFI LNGKPFYANG FNAYWLTYEA 60 TDPATRFKVT FALQNATIHG LTIARTWGFH DGGYRALQTA PGSYNELAFQ GLDFAIAEAK 120 RLGIKMIITF VNNYSDFGGR KQYVDWAKSK GQSVTSEDDF YTNPLVKQFY KNHVKTIVNR 180 VNTFTKVAYK DEPTIMAWEL MNEPQCKADP SGKTLTAWIR EMAPYVKSLD SKHLLSTGLE 240 GFYGDSSPKK KASLNPVAAN VLGTDFIANH NIDAIDFASF HAYPDSWFPN IDEKSRSDYL 300 RKWLEGHIED AQNILKKPLI LGEFGKPTTT PGYTQAQRDA VFNATFDIIY ASAQKGGPAA 360 GALFWHLISD GMNNFKDGLS IVLSDKSSTV NIIGQQSRKL GLIGGKGK* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.008 | 188 | 283 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 7.0e-7 | 42 | 337 | 304 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 1.0e-32 | 34 | 371 | 354 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABB45852.1 | 0 | 1 | 403 | 1 | 401 | hypothetical protein [Thellungiella halophila] |
RefSeq | NP_187700.1 | 0 | 1 | 408 | 1 | 408 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
RefSeq | NP_187701.1 | 0 | 1 | 404 | 1 | 403 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
RefSeq | NP_189675.1 | 0 | 1 | 350 | 1 | 333 | (1-4)-beta-mannan endohydrolase family [Arabidopsis thaliana] |
RefSeq | NP_201447.1 | 0 | 1 | 403 | 1 | 400 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 27 | 400 | 2 | 369 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 40 | 377 | 21 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 40 | 377 | 21 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 40 | 377 | 21 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 40 | 377 | 21 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |