y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01037212001 |
Family | GH5 |
Protein Properties | Length: 403 Molecular Weight: 45247.1 Isoelectric Point: 7.5632 |
Chromosome | Chromosome/Scaffold: 18 Start: 27926186 End: 27927919 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 42 | 346 | 4.2e-33 |
NGSPFFFNGFNSYWLMHISAEPSQRNKVSDVFRQASAAGLSVCRTWAFSDGGYQALQISPGVYDERVFQGLDFVISEARKNGIRLVLTLSNNYQDFGGRP QYVNWAKSAGVSVNNDDDFYINAVIKGYYKNHVKRVITRVNTITGVAYKDDPTIMAWELMNEPRCQIDYSGKTLNGWVQEMASYVKSIDNKHLLTVGMEG FYGDSLPERKPVNPGYQVGTDFISNHLIREIDFTTIHAYPDIWLNGKDDNAQMAFLQTWTTSHLTDSRTIIKKPMIFAEFGKSSKDPGYSINARDSFLNA VYTNI |
Full Sequence |
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Protein Sequence Length: 403 Download |
MVCFSRIGFF WGLFLLAALA CEARVLQNSG FVQTRNTQFI LNGSPFFFNG FNSYWLMHIS 60 AEPSQRNKVS DVFRQASAAG LSVCRTWAFS DGGYQALQIS PGVYDERVFQ GLDFVISEAR 120 KNGIRLVLTL SNNYQDFGGR PQYVNWAKSA GVSVNNDDDF YINAVIKGYY KNHVKRVITR 180 VNTITGVAYK DDPTIMAWEL MNEPRCQIDY SGKTLNGWVQ EMASYVKSID NKHLLTVGME 240 GFYGDSLPER KPVNPGYQVG TDFISNHLIR EIDFTTIHAY PDIWLNGKDD NAQMAFLQTW 300 TTSHLTDSRT IIKKPMIFAE FGKSSKDPGY SINARDSFLN AVYTNIYSSA RSGGMGGGLV 360 WQIMAEGMES YYDGYEIVLS KNPSTSSVIT QQSRRMAALD HM* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.005 | 66 | 211 | 167 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG2730 | BglC | 0.001 | 85 | 205 | 126 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 2.0e-6 | 144 | 342 | 214 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 2.0e-24 | 112 | 378 | 281 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC08208.1 | 0 | 13 | 402 | 18 | 409 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
EMBL | CBI17044.1 | 0 | 9 | 402 | 72 | 449 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002270023.1 | 0 | 1 | 402 | 1 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272344.1 | 0 | 1 | 402 | 1 | 402 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272567.1 | 0 | 21 | 402 | 21 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 28 | 399 | 3 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 40 | 388 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 40 | 388 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 40 | 388 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 40 | 388 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |