y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_008562m |
Family | GH5 |
Protein Properties | Length: 416 Molecular Weight: 46956.4 Isoelectric Point: 6.5285 |
Chromosome | Chromosome/Scaffold: 07012 Start: 903782 End: 906003 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 40 | 362 | 1.2e-34 |
NGSPFYANGFNAYWLMYFATDPSTRNKVSSVFQEARDHGLTLARTWAFNDAQDRALQYSPGSYSEQTFQGLDFVISEAKKYGIKLVLSLVNNYDSFGGKK QYVNWARSEGQSVSSDDDFFTNSVVKSYYKNHIKTVLTRRNTITGVAYKDEPTIMAWELMNEPRCTSDPSGRTIQAWITEMAAYLKSIDSNHLLEAGLEG FYGQGSSQKQQYNPNFQIGTDFIANNQIPGIDFATVHSYPDQWLPSSDSESQESFLNNWLNNHIQDAQNILRKPVLFAEFGKSSKTSSYNQRDQLFNTVY SAIYSSASGGGAAAGGMFWQLFT |
Full Sequence |
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Protein Sequence Length: 416 Download |
MKHWGLVFFV FLLVQKQGIF LPVEADDGFI TTKGVQFMLN GSPFYANGFN AYWLMYFATD 60 PSTRNKVSSV FQEARDHGLT LARTWAFNDA QDRALQYSPG SYSEQTFQGL DFVISEAKKY 120 GIKLVLSLVN NYDSFGGKKQ YVNWARSEGQ SVSSDDDFFT NSVVKSYYKN HIKTVLTRRN 180 TITGVAYKDE PTIMAWELMN EPRCTSDPSG RTIQAWITEM AAYLKSIDSN HLLEAGLEGF 240 YGQGSSQKQQ YNPNFQIGTD FIANNQIPGI DFATVHSYPD QWLPSSDSES QESFLNNWLN 300 NHIQDAQNIL RKPVLFAEFG KSSKTSSYNQ RDQLFNTVYS AIYSSASGGG AAAGGMFWQL 360 FTEGMDSFRD GYEVVFSENP STAGIIVDQS QKLNKIRKMY ARLRNIEKWN KARGD* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.002 | 186 | 278 | 102 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 0.0006 | 139 | 333 | 211 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 4.0e-27 | 37 | 322 | 286 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV32547.1 | 0 | 1 | 413 | 1 | 413 | endo-1,4-beta-mannosidase protein 1 [Prunus persica] |
GenBank | ACN78664.1 | 0 | 1 | 413 | 1 | 411 | endo-beta-mannanase [Malus x domestica] |
RefSeq | XP_002281804.1 | 0 | 1 | 414 | 1 | 416 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306881.1 | 0 | 1 | 413 | 1 | 413 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510418.1 | 0 | 1 | 413 | 1 | 414 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 25 | 396 | 2 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 38 | 403 | 21 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 38 | 403 | 21 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 38 | 403 | 21 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 38 | 403 | 21 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |