y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma19g41090.1 |
Family | GH5 |
Protein Properties | Length: 411 Molecular Weight: 46213.5 Isoelectric Point: 8.2017 |
Chromosome | Chromosome/Scaffold: 19 Start: 47403188 End: 47408256 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 52 | 374 | 8.6e-33 |
NNKRFYFNGFNAYWLMYMASDPSTRPKVTAVLQQASNHGLTVARTWAFSDGGYRALQVSPGSYDEKVFRGLDFVVSEAGKYGVRLILSLVNNWKDFGGKN QYVQWVKEHGQYVNSEDDFFSHPIAKQHYKNHIKAVLTRKNTITGVAYKDDPAIFAWELMNEPRSQHDNSGKVIQQWVIEMAAYVKSIDSNHLLEIGLEG FYGETMPEKKQINPGYQLIGTDFISNNLVHQVDFATMHLYPEQWLPGSNEAAQVAFVDKWLQTHIQDAKNVLAKPIVVGEFGKSLKSYSVVERDNYLSKM YNAIYSSASSGGPCAGGLFWQLM |
Full Sequence |
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Protein Sequence Length: 411 Download |
MGWNGRLKNM VIVITLMVAL VVVQHVKCGD SARILLQHGG FVQRSSTNFV LNNKRFYFNG 60 FNAYWLMYMA SDPSTRPKVT AVLQQASNHG LTVARTWAFS DGGYRALQVS PGSYDEKVFR 120 GLDFVVSEAG KYGVRLILSL VNNWKDFGGK NQYVQWVKEH GQYVNSEDDF FSHPIAKQHY 180 KNHIKAVLTR KNTITGVAYK DDPAIFAWEL MNEPRSQHDN SGKVIQQWVI EMAAYVKSID 240 SNHLLEIGLE GFYGETMPEK KQINPGYQLI GTDFISNNLV HQVDFATMHL YPEQWLPGSN 300 EAAQVAFVDK WLQTHIQDAK NVLAKPIVVG EFGKSLKSYS VVERDNYLSK MYNAIYSSAS 360 SGGPCAGGLF WQLMAQGMDG FRDGYEVVFE ESPSTTRIID QQSHKMSSIA * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.0004 | 80 | 355 | 280 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 7.0e-28 | 49 | 340 | 292 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABG88068.1 | 0 | 1 | 410 | 1 | 410 | endo-1,4-beta-mannanase [Glycine max] |
EMBL | CAC08442.1 | 0 | 42 | 410 | 45 | 416 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
RefSeq | XP_002281804.1 | 0 | 40 | 406 | 28 | 395 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302695.1 | 0 | 17 | 408 | 10 | 402 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515142.1 | 0 | 6 | 409 | 3 | 403 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 41 | 410 | 6 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 40 | 398 | 13 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 40 | 398 | 13 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 40 | 398 | 13 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 40 | 398 | 13 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |