y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb01g006080.1 |
Family | GH5 |
Protein Properties | Length: 511 Molecular Weight: 56537.7 Isoelectric Point: 6.7036 |
Chromosome | Chromosome/Scaffold: 1 Start: 5070285 End: 5074018 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 105 | 478 | 1e-37 |
PFYLNGFNAYWLMILAVDPSTRGKVTEVFQQAAAVGLTVCRTWGFNDGGWRALQKSPSVYDEDVFKALDFVVSEARKYRIRLILSLINNWDGYGGKAQYV KWARDDGGGGLINITSDDAFFSDQTVKGYFKNHVKNMLTRVNSYTSVMYKDDPTILAWELMNEPRCTSDPTGNTLQEWIQEMAFHVKSIDPDHLLEVGAE GFYGPSSPARLPANPNAYAGEVGTDFIRNHRVLGVDFASVHIYPDTWMSGAATLEAQLKFVASWMQAHIADGEGTLGGMPVVFTEFGASTKARSSAAFNA TTRDQFIQAVYGHLLNSTRRGGAGAGALLWQVFPEGTDYMDDGYGVVLPRAAATARIMSAHSKKLAVFNSRCAW |
Full Sequence |
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Protein Sequence Length: 511 Download |
MVKFATTMET VFKGRARART RVSLIHFFVR RCFAVAAAAI FLLTDGRHAH VDPAPLEILG 60 GADDVDTLAH QRPNVNGASS SEAIDDEQWR MVKTRGNQFV VGDRPFYLNG FNAYWLMILA 120 VDPSTRGKVT EVFQQAAAVG LTVCRTWGFN DGGWRALQKS PSVYDEDVFK ALDFVVSEAR 180 KYRIRLILSL INNWDGYGGK AQYVKWARDD GGGGLINITS DDAFFSDQTV KGYFKNHVKN 240 MLTRVNSYTS VMYKDDPTIL AWELMNEPRC TSDPTGNTLQ EWIQEMAFHV KSIDPDHLLE 300 VGAEGFYGPS SPARLPANPN AYAGEVGTDF IRNHRVLGVD FASVHIYPDT WMSGAATLEA 360 QLKFVASWMQ AHIADGEGTL GGMPVVFTEF GASTKARSSA AFNATTRDQF IQAVYGHLLN 420 STRRGGAGAG ALLWQVFPEG TDYMDDGYGV VLPRAAATAR IMSAHSKKLA VFNSRCAWSC 480 RWGCRRSEQQ SEDDDDDLPF VSRMNRAEHI * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.003 | 147 | 456 | 342 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam12876 | Cellulase-like | 0.002 | 253 | 347 | 106 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 9.0e-8 | 192 | 395 | 217 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 6.0e-25 | 106 | 419 | 319 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAV44080.1 | 0 | 79 | 500 | 93 | 516 | hypothetical protein [Oryza sativa Japonica Group] |
EMBL | CBI18019.1 | 0 | 86 | 486 | 67 | 458 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | Q5W6G0 | 0 | 79 | 500 | 64 | 487 | MAN5_ORYSJ RecName: Full=Putative mannan endo-1,4-beta-mannosidase 5; AltName: Full=Beta-mannanase 5; AltName: Full=Endo-beta-1,4-mannanase 5; AltName: Full=OsMAN5; Flags: Precursor |
RefSeq | XP_002273389.1 | 0 | 86 | 486 | 6 | 397 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002466346.1 | 0 | 1 | 510 | 1 | 510 | hypothetical protein SORBIDRAFT_01g006080 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 90 | 470 | 5 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 95 | 448 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 95 | 448 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 95 | 448 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 95 | 448 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |