y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.A01823.1 |
Family | GH5 |
Protein Properties | Length: 436 Molecular Weight: 49948.3 Isoelectric Point: 6.3554 |
Chromosome | Chromosome/Scaffold: 1 Start: 28513348 End: 28517628 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 56 | 381 | 1.1e-35 |
GKVFYVNGWNSYWLMDQAVDEYSRPRVRTVLQAGARMGLTVCRTWAFNDNTYHALQIAPGQFDEGVFQALDLVIAEANQHGIRLLLSLVNNLQAFGGKTQ YVKWAWEEGIGLSSSNDSFFYDPSIRQYYKNYVKAVLTRKNTITGIEYRDDPTIFGWELMNEPRCMTDPAGDTLQDWLEEMSTFVRSIDKKHLLTVGLEG FYGPKNPKSLTVNPADWAALYGSDFVHNSNLPNIDFASAHIYPDHWFHEIEFEESVKFVSKWVRSHIDDGDRELKKPVMFTEFGYSNQNPNFHPSQRDRF FKTIFDEIYASARKNGAGAGSFVWQF |
Full Sequence |
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Protein Sequence Length: 436 Download |
MTSRTVARNG LFYPIVGFAS CVAFIYLSFG DFRLNFYVGK RMDFVGRNGT QFVVDGKVFY 60 VNGWNSYWLM DQAVDEYSRP RVRTVLQAGA RMGLTVCRTW AFNDNTYHAL QIAPGQFDEG 120 VFQALDLVIA EANQHGIRLL LSLVNNLQAF GGKTQYVKWA WEEGIGLSSS NDSFFYDPSI 180 RQYYKNYVKA VLTRKNTITG IEYRDDPTIF GWELMNEPRC MTDPAGDTLQ DWLEEMSTFV 240 RSIDKKHLLT VGLEGFYGPK NPKSLTVNPA DWAALYGSDF VHNSNLPNID FASAHIYPDH 300 WFHEIEFEES VKFVSKWVRS HIDDGDRELK KPVMFTEFGY SNQNPNFHPS QRDRFFKTIF 360 DEIYASARKN GAGAGSFVWQ FFVGGMEEYN DDFGIVPWQR SSTYQLITEH SCRLAALRGL 420 NQLKGSLREL CLQDK* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.001 | 98 | 390 | 309 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam12876 | Cellulase-like | 4.0e-5 | 202 | 297 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 6.0e-6 | 157 | 351 | 205 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 2.0e-28 | 57 | 433 | 384 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95966.1 | 0 | 4 | 433 | 3 | 433 | unknown [Populus trichocarpa] |
GenBank | ACN78665.1 | 0 | 5 | 433 | 13 | 441 | endo-beta-mannanase [Malus x domestica] |
EMBL | CBI21857.1 | 0 | 6 | 431 | 2 | 428 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273772.1 | 0 | 4 | 431 | 5 | 433 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002330687.1 | 0 | 4 | 433 | 3 | 433 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 43 | 417 | 5 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 53 | 423 | 21 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 53 | 423 | 21 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 53 | 423 | 21 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 53 | 423 | 21 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |