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Genome Details

Selected Rep_genome_ID: Rep_2297
Total Genomes Found: 19
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Ruminococcus_B
→
Species
Ruminococcus_B gnavus
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A171.CMAG_3 3,925,470 99.42% 0.68% China(Inner Mongolia) Asia IMGG
AG317_bin.4 2,920,104 99.42% 0% NA Africa H3AfricaPhase2
CGMR013142 3,130,189 99.42% 0% China Asia CGMR
Rep_2297 2,838,555 99.4152% 0% NA NA WIS
SPMP09_bin.4 3,387,636 97.54% 0.58% Singapore Asia SPMP
SPMP21_bin.39 2,938,814 90.62% 0.39% Singapore Asia SPMP
SPMP27_bin.33 2,938,733 93.57% 0.88% Singapore Asia SPMP
SPMP32_bin.35 2,683,584 98.25% 0% Singapore Asia SPMP
SPMP33_bin.82 2,766,972 98.15% 1.75% Singapore Asia SPMP
SPMP42_bin.22 2,905,357 96.49% 0.19% Singapore Asia SPMP
SPMP46_bin.80 2,604,636 92.28% 1.25% Singapore Asia SPMP
SPMP56_bin.47 2,979,866 94.61% 2.05% Singapore Asia SPMP
SPMP64_bin.67 2,693,134 93.19% 3.14% Singapore Asia SPMP
SPMP65_bin.57 2,726,955 96.31% 0% Singapore Asia SPMP
SPMP72_bin.42 3,193,665 98.83% 0.39% Singapore Asia SPMP
SPMP75_bin.13 3,327,494 95.03% 4.99% Singapore Asia SPMP
SPMP77_bin.7 2,444,971 94.13% 1.56% Singapore Asia SPMP
SPMP90_bin.19 3,022,373 91.6% 2.05% Singapore Asia SPMP
SPMP91_bin.33 3,182,364 99.42% 0.39% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_2297_CGC4 CGCFAM_00012 Yes 11 2 host glycan/beta-glucan
Rep_2297_CGC15 CGCFAM_00020 Yes 4 1 host glycan/beta-glucan
Rep_2297_CGC2 CGCFAM_00035 Yes 9 2 fructan
Rep_2297_CGC14 CGCFAM_00057 Yes 8 1
Rep_2297_CGC21 CGCFAM_00098 Yes 9 6
Rep_2297_CGC42 CGCFAM_00174 Yes 7 1 alpha-glucan
Rep_2297_CGC24 CGCFAM_00466 Yes 14 7
Rep_2297_CGC25 CGCFAM_00637 Yes 4 1
Rep_2297_CGC32 CGCFAM_00658 Yes 18 9
Rep_2297_CGC18 CGCFAM_00859 Yes 8 1
Rep_2297_CGC28 CGCFAM_01109 Yes 5 1
Rep_2297_CGC12 CGCFAM_01271 Yes 3 1
Rep_2297_CGC27 CGCFAM_01280 Yes 8 3
Rep_2297_CGC9 CGCFAM_01718 Yes 5 1
Rep_2297_CGC34 CGCFAM_01878 Yes 10 1
Rep_2297_CGC47 CGCFAM_03012 Yes 6 2
Rep_2297_CGC22 CGCFAM_03612 Yes 6 1
Rep_2297_CGC46 CGCFAM_03751 Yes 10 4
Rep_2297_CGC16 CGCFAM_03768 Yes 4 1
Rep_2297_CGC35 CGCFAM_04114 Yes 10 4
Rep_2297_CGC13 CGCFAM_04292 Yes 13 4
Rep_2297_CGC26 CGCFAM_04988 Yes 5 1
Rep_2297_CGC40 CGCFAM_06339 Yes 4 2
Rep_2297_CGC7 CGCFAM_08845 Yes 10 1
Rep_2297_CGC44 CGCFAM_09187 Yes 10 3
Top CAZyme Families