Cluster: Rep_2297_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2297
- CGC Family ID: CGCFAM_01718
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2297_c_1 | Rep_2297_c_1_6 | 5236 | 5907 | + | 3.A.1.122.14 |
| pfam | Rep_2297_c_1 | Rep_2297_c_1_7 | 5911 | 8664 | + | FtsX | FtsX |
| NULL(UNKNOWN) | Rep_2297_c_1 | Rep_2297_c_1_8 | 8686 | 8862 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2297_c_1 | Rep_2297_c_1_9 | 8906 | 10117 | + | CE9 |
| TC | Rep_2297_c_1 | Rep_2297_c_1_10 | 10169 | 11500 | - | 1.A.26.1.2 |
Gene ID: Rep_2297_c_1_6
Type: TC
Location: 5236 - 5907 (+)
Type: TC
Location: 5236 - 5907 (+)
Gene ID: Rep_2297_c_1_7
Type: pfam
Location: 5911 - 8664 (+)
Type: pfam
Location: 5911 - 8664 (+)
Gene ID: Rep_2297_c_1_8
Type:
Location: 8686 - 8862 (+)
Type:
Location: 8686 - 8862 (+)
Gene ID: Rep_2297_c_1_9
Type: CAZyme
Location: 8906 - 10117 (+)
Type: CAZyme
Location: 8906 - 10117 (+)
Gene ID: Rep_2297_c_1_10
Type: TC
Location: 10169 - 11500 (-)
Type: TC
Location: 10169 - 11500 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.