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Cluster: Rep_2297_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2297_c_0 Rep_2297_c_0_247 262902 264623 - 3.A.1.106.2
TC Rep_2297_c_0 Rep_2297_c_0_248 264860 266230 + 2.A.66.1.32
TC Rep_2297_c_0 Rep_2297_c_0_249 266357 268900 + 9.B.74.1.1
TC Rep_2297_c_0 Rep_2297_c_0_250 268897 271077 + 9.B.74.1.1
pfam Rep_2297_c_0 Rep_2297_c_0_251 271188 272126 + Dus
TC Rep_2297_c_0 Rep_2297_c_0_252 272142 272690 + 9.B.105.1.3
TC Rep_2297_c_0 Rep_2297_c_0_253 272919 274802 + 4.A.1.2.2
CAZyme Rep_2297_c_0 Rep_2297_c_0_254 274821 276239 + GH1
pfam Rep_2297_c_0 Rep_2297_c_0_255 276194 277117 + PRD | PRD | CAT_RBD
TC Rep_2297_c_0 Rep_2297_c_0_256 277114 277743 + 2.A.115.2.9
Gene ID: Rep_2297_c_0_247
Type: TC
Location: 262902 - 264623 (-)
Gene ID: Rep_2297_c_0_248
Type: TC
Location: 264860 - 266230 (+)
Gene ID: Rep_2297_c_0_249
Type: TC
Location: 266357 - 268900 (+)
Gene ID: Rep_2297_c_0_250
Type: TC
Location: 268897 - 271077 (+)
Gene ID: Rep_2297_c_0_251
Type: pfam
Location: 271188 - 272126 (+)
Gene ID: Rep_2297_c_0_252
Type: TC
Location: 272142 - 272690 (+)
Gene ID: Rep_2297_c_0_253
Type: TC
Location: 272919 - 274802 (+)
Gene ID: Rep_2297_c_0_254
Type: CAZyme
Location: 274821 - 276239 (+)
Gene ID: Rep_2297_c_0_255
Type: pfam
Location: 276194 - 277117 (+)
Gene ID: Rep_2297_c_0_256
Type: TC
Location: 277114 - 277743 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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