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Cluster: Rep_2297_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2297_c_3 Rep_2297_c_3_367 383132 385522 - GH31_15
TC Rep_2297_c_3 Rep_2297_c_3_368 385544 386437 - 3.A.1.1.9
TC Rep_2297_c_3 Rep_2297_c_3_369 386456 387370 - 3.A.1.1.9
TC Rep_2297_c_3 Rep_2297_c_3_370 387425 389122 - 3.A.1.1.10
TC Rep_2297_c_3 Rep_2297_c_3_371 389280 390998 - 8.A.59.2.1
TF Rep_2297_c_3 Rep_2297_c_3_372 391004 392524 - HTH_AraC | HTH_AraC
CAZyme Rep_2297_c_3 Rep_2297_c_3_373 392607 394235 - GH13_31
CAZyme Rep_2297_c_3 Rep_2297_c_3_374 394420 400725 - GH95
Gene ID: Rep_2297_c_3_367
Type: CAZyme
Location: 383132 - 385522 (-)
Gene ID: Rep_2297_c_3_368
Type: TC
Location: 385544 - 386437 (-)
Gene ID: Rep_2297_c_3_369
Type: TC
Location: 386456 - 387370 (-)
Gene ID: Rep_2297_c_3_370
Type: TC
Location: 387425 - 389122 (-)
Gene ID: Rep_2297_c_3_371
Type: TC
Location: 389280 - 390998 (-)
Gene ID: Rep_2297_c_3_372
Type: TF
Location: 391004 - 392524 (-)
Gene ID: Rep_2297_c_3_373
Type: CAZyme
Location: 392607 - 394235 (-)
Gene ID: Rep_2297_c_3_374
Type: CAZyme
Location: 394420 - 400725 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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