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Cluster: Rep_2297_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2297_c_1 Rep_2297_c_1_202 227630 229498 + 1.A.33.1.4
pfam Rep_2297_c_1 Rep_2297_c_1_203 229623 230822 + DnaJ | DnaJ_CXXCXGXG | DnaJ_C
CAZyme Rep_2297_c_1 Rep_2297_c_1_204 230853 232982 - GH13_11
NULL(UNKNOWN) Rep_2297_c_1 Rep_2297_c_1_205 233082 233807 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2297_c_1 Rep_2297_c_1_206 234108 235490 + 2.A.66.1.34
TF Rep_2297_c_1 Rep_2297_c_1_207 235592 235936 + DUF24
STP Rep_2297_c_1 Rep_2297_c_1_208 236096 236779 + Peripla_BP_2
TC Rep_2297_c_1 Rep_2297_c_1_209 236891 237736 + 3.A.1.132.3
Gene ID: Rep_2297_c_1_202
Type: TC
Location: 227630 - 229498 (+)
Gene ID: Rep_2297_c_1_203
Type: pfam
Location: 229623 - 230822 (+)
Gene ID: Rep_2297_c_1_204
Type: CAZyme
Location: 230853 - 232982 (-)
Gene ID: Rep_2297_c_1_205
Type:
Location: 233082 - 233807 (+)
Gene ID: Rep_2297_c_1_206
Type: TC
Location: 234108 - 235490 (+)
Gene ID: Rep_2297_c_1_207
Type: TF
Location: 235592 - 235936 (+)
Gene ID: Rep_2297_c_1_208
Type: STP
Location: 236096 - 236779 (+)
Gene ID: Rep_2297_c_1_209
Type: TC
Location: 236891 - 237736 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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