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Cluster: Rep_2297_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2297_c_3 Rep_2297_c_3_88 74317 75663 - 2.A.66.1.33
CAZyme Rep_2297_c_3 Rep_2297_c_3_89 75828 77456 - GH13_31
CAZyme Rep_2297_c_3 Rep_2297_c_3_90 77469 79223 - CBM34 | GH13_20
CAZyme Rep_2297_c_3 Rep_2297_c_3_91 79236 80705 - GH77
CAZyme Rep_2297_c_3 Rep_2297_c_3_92 80736 82997 - GT35
CAZyme Rep_2297_c_3 Rep_2297_c_3_93 83025 84968 - GH133
CAZyme Rep_2297_c_3 Rep_2297_c_3_94 84975 86915 - GH13_14
TC Rep_2297_c_3 Rep_2297_c_3_95 86929 87801 - 3.A.1.1.27
TC Rep_2297_c_3 Rep_2297_c_3_96 87804 89183 - 3.A.1.1.27
Gene ID: Rep_2297_c_3_88
Type: TC
Location: 74317 - 75663 (-)
Gene ID: Rep_2297_c_3_89
Type: CAZyme
Location: 75828 - 77456 (-)
Gene ID: Rep_2297_c_3_90
Type: CAZyme
Location: 77469 - 79223 (-)
Gene ID: Rep_2297_c_3_91
Type: CAZyme
Location: 79236 - 80705 (-)
Gene ID: Rep_2297_c_3_92
Type: CAZyme
Location: 80736 - 82997 (-)
Gene ID: Rep_2297_c_3_93
Type: CAZyme
Location: 83025 - 84968 (-)
Gene ID: Rep_2297_c_3_94
Type: CAZyme
Location: 84975 - 86915 (-)
Gene ID: Rep_2297_c_3_95
Type: TC
Location: 86929 - 87801 (-)
Gene ID: Rep_2297_c_3_96
Type: TC
Location: 87804 - 89183 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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