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Cluster: Rep_2297_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2297_c_0 Rep_2297_c_0_175 173805 175136 + GH29
TC Rep_2297_c_0 Rep_2297_c_0_176 175161 176546 + 4.A.3.2.3
CAZyme Rep_2297_c_0 Rep_2297_c_0_177 176550 177899 + GH1
TC Rep_2297_c_0 Rep_2297_c_0_178 177899 178210 + 4.A.3.2.2
TC Rep_2297_c_0 Rep_2297_c_0_179 178207 178515 + 4.A.3.2.9
peptidase Rep_2297_c_0 Rep_2297_c_0_180 178783 180456 + M03.010
TC Rep_2297_c_0 Rep_2297_c_0_181 180587 182320 + 3.A.1.5.20
TC Rep_2297_c_0 Rep_2297_c_0_182 182513 183475 + 3.A.1.5.20
TC Rep_2297_c_0 Rep_2297_c_0_183 183491 184423 + 3.A.1.5.20
TC Rep_2297_c_0 Rep_2297_c_0_184 184449 185435 + 3.A.1.5.12
TC Rep_2297_c_0 Rep_2297_c_0_185 185436 186410 + 3.A.1.5.20
Gene ID: Rep_2297_c_0_175
Type: CAZyme
Location: 173805 - 175136 (+)
Gene ID: Rep_2297_c_0_176
Type: TC
Location: 175161 - 176546 (+)
Gene ID: Rep_2297_c_0_177
Type: CAZyme
Location: 176550 - 177899 (+)
Gene ID: Rep_2297_c_0_178
Type: TC
Location: 177899 - 178210 (+)
Gene ID: Rep_2297_c_0_179
Type: TC
Location: 178207 - 178515 (+)
Gene ID: Rep_2297_c_0_180
Type: peptidase
Location: 178783 - 180456 (+)
Gene ID: Rep_2297_c_0_181
Type: TC
Location: 180587 - 182320 (+)
Gene ID: Rep_2297_c_0_182
Type: TC
Location: 182513 - 183475 (+)
Gene ID: Rep_2297_c_0_183
Type: TC
Location: 183491 - 184423 (+)
Gene ID: Rep_2297_c_0_184
Type: TC
Location: 184449 - 185435 (+)
Gene ID: Rep_2297_c_0_185
Type: TC
Location: 185436 - 186410 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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