Cluster: Rep_2297_CGC40
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2297
- CGC Family ID: CGCFAM_06339
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2297_c_9 | Rep_2297_c_9_2 | 2432 | 6505 | - | GH98 |
| CAZyme | Rep_2297_c_9 | Rep_2297_c_9_3 | 6772 | 7575 | - | CBM50 | GH73 |
| pfam | Rep_2297_c_9 | Rep_2297_c_9_4 | 7603 | 7812 | - | Glucosaminidase |
| TC | Rep_2297_c_9 | Rep_2297_c_9_5 | 7809 | 8249 | - | 1.E.19.1.10 |
Gene ID: Rep_2297_c_9_2
Type: CAZyme
Location: 2432 - 6505 (-)
Type: CAZyme
Location: 2432 - 6505 (-)
Gene ID: Rep_2297_c_9_3
Type: CAZyme
Location: 6772 - 7575 (-)
Type: CAZyme
Location: 6772 - 7575 (-)
Gene ID: Rep_2297_c_9_4
Type: pfam
Location: 7603 - 7812 (-)
Type: pfam
Location: 7603 - 7812 (-)
Gene ID: Rep_2297_c_9_5
Type: TC
Location: 7809 - 8249 (-)
Type: TC
Location: 7809 - 8249 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.