Cluster: Rep_2297_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2297
- CGC Family ID: CGCFAM_01271
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2297_c_1 | Rep_2297_c_1_73 | 80028 | 82259 | + | GH36 |
| TF | Rep_2297_c_1 | Rep_2297_c_1_74 | 82297 | 83127 | - | HTH_AraC | HTH_AraC |
| TC | Rep_2297_c_1 | Rep_2297_c_1_75 | 83349 | 84314 | + | 3.A.1.141.1 |
Gene ID: Rep_2297_c_1_73
Type: CAZyme
Location: 80028 - 82259 (+)
Type: CAZyme
Location: 80028 - 82259 (+)
Gene ID: Rep_2297_c_1_74
Type: TF
Location: 82297 - 83127 (-)
Type: TF
Location: 82297 - 83127 (-)
Gene ID: Rep_2297_c_1_75
Type: TC
Location: 83349 - 84314 (+)
Type: TC
Location: 83349 - 84314 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.