Cluster: Rep_2297_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2297
- CGC Family ID: CGCFAM_00637
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2297_c_3 | Rep_2297_c_3_344 | 356698 | 357900 | - | 2.A.86.1.8 |
| CAZyme | Rep_2297_c_3 | Rep_2297_c_3_345 | 357989 | 360259 | - | GH3 |
| pfam | Rep_2297_c_3 | Rep_2297_c_3_346 | 360396 | 360662 | - | Ribosomal_S18 |
| TC | Rep_2297_c_3 | Rep_2297_c_3_347 | 360702 | 361148 | - | 3.A.7.19.1 |
Gene ID: Rep_2297_c_3_344
Type: TC
Location: 356698 - 357900 (-)
Type: TC
Location: 356698 - 357900 (-)
Gene ID: Rep_2297_c_3_345
Type: CAZyme
Location: 357989 - 360259 (-)
Type: CAZyme
Location: 357989 - 360259 (-)
Gene ID: Rep_2297_c_3_346
Type: pfam
Location: 360396 - 360662 (-)
Type: pfam
Location: 360396 - 360662 (-)
Gene ID: Rep_2297_c_3_347
Type: TC
Location: 360702 - 361148 (-)
Type: TC
Location: 360702 - 361148 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.