Cluster: Rep_2297_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2297
- CGC Family ID: CGCFAM_03612
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2297_c_3 | Rep_2297_c_3_200 | 202104 | 203222 | - | GH172 |
| NULL(UNKNOWN) | Rep_2297_c_3 | Rep_2297_c_3_201 | 203206 | 205380 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2297_c_3 | Rep_2297_c_3_202 | 205397 | 206221 | - | 4.A.6.1.1 |
| TC | Rep_2297_c_3 | Rep_2297_c_3_203 | 206218 | 207015 | - | 4.A.6.1.19 |
| TC | Rep_2297_c_3 | Rep_2297_c_3_204 | 207044 | 207529 | - | 4.A.6.1.19 |
| TC | Rep_2297_c_3 | Rep_2297_c_3_205 | 207806 | 208231 | - | 4.A.6.1.19 |
Gene ID: Rep_2297_c_3_200
Type: CAZyme
Location: 202104 - 203222 (-)
Type: CAZyme
Location: 202104 - 203222 (-)
Gene ID: Rep_2297_c_3_201
Type:
Location: 203206 - 205380 (-)
Type:
Location: 203206 - 205380 (-)
Gene ID: Rep_2297_c_3_202
Type: TC
Location: 205397 - 206221 (-)
Type: TC
Location: 205397 - 206221 (-)
Gene ID: Rep_2297_c_3_203
Type: TC
Location: 206218 - 207015 (-)
Type: TC
Location: 206218 - 207015 (-)
Gene ID: Rep_2297_c_3_204
Type: TC
Location: 207044 - 207529 (-)
Type: TC
Location: 207044 - 207529 (-)
Gene ID: Rep_2297_c_3_205
Type: TC
Location: 207806 - 208231 (-)
Type: TC
Location: 207806 - 208231 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.