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Cluster: Rep_2297_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2297_c_4 Rep_2297_c_4_80 82005 83144 - GH105
TF Rep_2297_c_4 Rep_2297_c_4_81 83238 84143 + HTH_AraC | HTH_AraC
TC Rep_2297_c_4 Rep_2297_c_4_82 84118 85425 - 2.A.56.1.5
TC Rep_2297_c_4 Rep_2297_c_4_83 85426 85893 - 2.A.56.1.6
TC Rep_2297_c_4 Rep_2297_c_4_84 85893 86933 - 2.A.56.1.5
Gene ID: Rep_2297_c_4_80
Type: CAZyme
Location: 82005 - 83144 (-)
Gene ID: Rep_2297_c_4_81
Type: TF
Location: 83238 - 84143 (+)
Gene ID: Rep_2297_c_4_82
Type: TC
Location: 84118 - 85425 (-)
Gene ID: Rep_2297_c_4_83
Type: TC
Location: 85426 - 85893 (-)
Gene ID: Rep_2297_c_4_84
Type: TC
Location: 85893 - 86933 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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