Cluster: Rep_2297_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2297
- CGC Family ID: CGCFAM_04988
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2297_c_3 | Rep_2297_c_3_359 | 373160 | 375154 | - | GH151 |
| TC | Rep_2297_c_3 | Rep_2297_c_3_360 | 375182 | 376030 | - | 3.A.1.1.18 |
| TC | Rep_2297_c_3 | Rep_2297_c_3_361 | 376043 | 376930 | - | 3.A.1.1.7 |
| TC | Rep_2297_c_3 | Rep_2297_c_3_362 | 377010 | 378326 | - | 3.A.1.1.47 |
| TC | Rep_2297_c_3 | Rep_2297_c_3_363 | 378532 | 380241 | + | 8.A.59.2.1 |
Gene ID: Rep_2297_c_3_359
Type: CAZyme
Location: 373160 - 375154 (-)
Type: CAZyme
Location: 373160 - 375154 (-)
Gene ID: Rep_2297_c_3_360
Type: TC
Location: 375182 - 376030 (-)
Type: TC
Location: 375182 - 376030 (-)
Gene ID: Rep_2297_c_3_361
Type: TC
Location: 376043 - 376930 (-)
Type: TC
Location: 376043 - 376930 (-)
Gene ID: Rep_2297_c_3_362
Type: TC
Location: 377010 - 378326 (-)
Type: TC
Location: 377010 - 378326 (-)
Gene ID: Rep_2297_c_3_363
Type: TC
Location: 378532 - 380241 (+)
Type: TC
Location: 378532 - 380241 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.