Cluster: Rep_2297_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2297
- CGC Family ID: CGCFAM_03768
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2297_c_1 | Rep_2297_c_1_296 | 330977 | 331642 | + | GT51 |
| TC | Rep_2297_c_1 | Rep_2297_c_1_297 | 331733 | 333100 | + | 9.A.11.1.1 |
| pfam | Rep_2297_c_1 | Rep_2297_c_1_298 | 333238 | 334101 | + | DegV |
| TC | Rep_2297_c_1 | Rep_2297_c_1_299 | 334192 | 335553 | - | 2.A.22.5.3 |
Gene ID: Rep_2297_c_1_296
Type: CAZyme
Location: 330977 - 331642 (+)
Type: CAZyme
Location: 330977 - 331642 (+)
Gene ID: Rep_2297_c_1_297
Type: TC
Location: 331733 - 333100 (+)
Type: TC
Location: 331733 - 333100 (+)
Gene ID: Rep_2297_c_1_298
Type: pfam
Location: 333238 - 334101 (+)
Type: pfam
Location: 333238 - 334101 (+)
Gene ID: Rep_2297_c_1_299
Type: TC
Location: 334192 - 335553 (-)
Type: TC
Location: 334192 - 335553 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.