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Genome Details

Selected Rep_genome_ID: HRGMv2_4536
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Gemmiger
→
Species
Gemmiger formicilis_B
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_4536 3,059,752 97.95% 0.68% Japan Asia HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_4536_CGC34 CGCFAM_00008 Yes 5 2
HRGMv2_4536_CGC6 CGCFAM_00010 Yes 8 1 alpha-glucan
HRGMv2_4536_CGC35 CGCFAM_00027 Yes 4 2
HRGMv2_4536_CGC19 CGCFAM_00035 Yes 5 1 fructan
HRGMv2_4536_CGC10 CGCFAM_00055 Yes 6 3
HRGMv2_4536_CGC38 CGCFAM_00098 Yes 10 6
HRGMv2_4536_CGC45 CGCFAM_00157 Yes 7 2
HRGMv2_4536_CGC43 CGCFAM_00230 Yes 5 1
HRGMv2_4536_CGC24 CGCFAM_00335 Yes 6 2
HRGMv2_4536_CGC16 CGCFAM_00342 Yes 9 3
HRGMv2_4536_CGC1 CGCFAM_00587 Yes 3 1
HRGMv2_4536_CGC9 CGCFAM_00678 Yes 5 2
HRGMv2_4536_CGC27 CGCFAM_00696 Yes 4 1
HRGMv2_4536_CGC7 CGCFAM_01316 Yes 5 3
HRGMv2_4536_CGC12 CGCFAM_01317 Yes 6 2
HRGMv2_4536_CGC41 CGCFAM_01318 Yes 4 1
HRGMv2_4536_CGC17 CGCFAM_01579 Yes 7 2
HRGMv2_4536_CGC3 CGCFAM_01900 Yes 3 1
HRGMv2_4536_CGC5 CGCFAM_02103 Yes 5 1
HRGMv2_4536_CGC55 CGCFAM_02175 Yes 7 4
HRGMv2_4536_CGC47 CGCFAM_02214 Yes 4 3
HRGMv2_4536_CGC30 CGCFAM_02254 Yes 7 1
HRGMv2_4536_CGC28 CGCFAM_03125 Yes 11 2
HRGMv2_4536_CGC54 CGCFAM_04020 Yes 17 8
HRGMv2_4536_CGC39 CGCFAM_04433 Yes 3 1
Top CAZyme Families