Cluster: HRGMv2_4536_CGC47
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4536
- CGC Family ID: CGCFAM_02214
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4536_83 | HRGMv2_4536_83_17 | 22886 | 23713 | - | CE1 |
| TC | HRGMv2_4536_83 | HRGMv2_4536_83_18 | 23704 | 24717 | - | 2.A.66.1.32 |
| CAZyme | HRGMv2_4536_83 | HRGMv2_4536_83_19 | 24808 | 25968 | - | GH79 |
| CAZyme | HRGMv2_4536_83 | HRGMv2_4536_83_20 | 25940 | 28192 | - | GH3 |
Gene ID: HRGMv2_4536_83_17
Type: CAZyme
Location: 22886 - 23713 (-)
Type: CAZyme
Location: 22886 - 23713 (-)
Gene ID: HRGMv2_4536_83_18
Type: TC
Location: 23704 - 24717 (-)
Type: TC
Location: 23704 - 24717 (-)
Gene ID: HRGMv2_4536_83_19
Type: CAZyme
Location: 24808 - 25968 (-)
Type: CAZyme
Location: 24808 - 25968 (-)
Gene ID: HRGMv2_4536_83_20
Type: CAZyme
Location: 25940 - 28192 (-)
Type: CAZyme
Location: 25940 - 28192 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.