dbCAN Logo

Cluster: HRGMv2_4536_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4536_27 HRGMv2_4536_27_1 48 1529 - GH77
TF HRGMv2_4536_27 HRGMv2_4536_27_2 1549 2574 - LacI
TC HRGMv2_4536_27 HRGMv2_4536_27_3 2634 3482 - 3.A.1.1.45
TC HRGMv2_4536_27 HRGMv2_4536_27_4 3482 4333 - 3.A.1.1.45
TC HRGMv2_4536_27 HRGMv2_4536_27_5 4435 5784 - 3.A.1.1.45
pfam HRGMv2_4536_27 HRGMv2_4536_27_6 6118 7317 - YibE_F
pfam HRGMv2_4536_27 HRGMv2_4536_27_7 7440 9065 - Alk_phosphatase | Alk_phosphatase
TC HRGMv2_4536_27 HRGMv2_4536_27_8 9404 10531 - 2.A.86.1.8
Gene ID: HRGMv2_4536_27_1
Type: CAZyme
Location: 48 - 1529 (-)
Gene ID: HRGMv2_4536_27_2
Type: TF
Location: 1549 - 2574 (-)
Gene ID: HRGMv2_4536_27_3
Type: TC
Location: 2634 - 3482 (-)
Gene ID: HRGMv2_4536_27_4
Type: TC
Location: 3482 - 4333 (-)
Gene ID: HRGMv2_4536_27_5
Type: TC
Location: 4435 - 5784 (-)
Gene ID: HRGMv2_4536_27_6
Type: pfam
Location: 6118 - 7317 (-)
Gene ID: HRGMv2_4536_27_7
Type: pfam
Location: 7440 - 9065 (-)
Gene ID: HRGMv2_4536_27_8
Type: TC
Location: 9404 - 10531 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List