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Cluster: HRGMv2_4536_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4536_72 HRGMv2_4536_72_11 9331 10011 + 3.A.1.125.3
pfam HRGMv2_4536_72 HRGMv2_4536_72_12 10011 12251 + FtsX | FtsX
CAZyme HRGMv2_4536_72 HRGMv2_4536_72_13 12302 13942 - GH13_31
CAZyme HRGMv2_4536_72 HRGMv2_4536_72_14 14007 15722 - CBM34 | GH13_20
CAZyme HRGMv2_4536_72 HRGMv2_4536_72_15 15719 17194 - GH77
CAZyme HRGMv2_4536_72 HRGMv2_4536_72_16 17205 19463 - GT35
CAZyme HRGMv2_4536_72 HRGMv2_4536_72_17 19475 21436 - GH133
CAZyme HRGMv2_4536_72 HRGMv2_4536_72_18 21453 23381 - GH13_14
TC HRGMv2_4536_72 HRGMv2_4536_72_19 23421 24218 - 3.A.1.1.27
TC HRGMv2_4536_72 HRGMv2_4536_72_20 24290 25669 - 3.A.1.1.27
Gene ID: HRGMv2_4536_72_11
Type: TC
Location: 9331 - 10011 (+)
Gene ID: HRGMv2_4536_72_12
Type: pfam
Location: 10011 - 12251 (+)
Gene ID: HRGMv2_4536_72_13
Type: CAZyme
Location: 12302 - 13942 (-)
Gene ID: HRGMv2_4536_72_14
Type: CAZyme
Location: 14007 - 15722 (-)
Gene ID: HRGMv2_4536_72_15
Type: CAZyme
Location: 15719 - 17194 (-)
Gene ID: HRGMv2_4536_72_16
Type: CAZyme
Location: 17205 - 19463 (-)
Gene ID: HRGMv2_4536_72_17
Type: CAZyme
Location: 19475 - 21436 (-)
Gene ID: HRGMv2_4536_72_18
Type: CAZyme
Location: 21453 - 23381 (-)
Gene ID: HRGMv2_4536_72_19
Type: TC
Location: 23421 - 24218 (-)
Gene ID: HRGMv2_4536_72_20
Type: TC
Location: 24290 - 25669 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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