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Cluster: HRGMv2_4536_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4536_53 HRGMv2_4536_53_99 118551 120326 + 3.A.1.106.2
pfam HRGMv2_4536_53 HRGMv2_4536_53_100 120369 121679 - MatE | Polysacc_synt
pfam HRGMv2_4536_53 HRGMv2_4536_53_101 121793 122602 + PNP_UDP_1
TC HRGMv2_4536_53 HRGMv2_4536_53_102 122688 123512 + 3.A.1.132.3
TC HRGMv2_4536_53 HRGMv2_4536_53_103 123535 123996 + 1.A.22.1.3
STP HRGMv2_4536_53 HRGMv2_4536_53_104 124233 128783 + GATase_2
STP HRGMv2_4536_53 HRGMv2_4536_53_105 128798 130270 + Pyr_redox_2
CAZyme HRGMv2_4536_53 HRGMv2_4536_53_106 130338 131660 - GH13_20
NULL(UNKNOWN) HRGMv2_4536_53 HRGMv2_4536_53_107 131707 132246 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4536_53 HRGMv2_4536_53_108 132280 133035 - CE4
TC HRGMv2_4536_53 HRGMv2_4536_53_109 133207 134673 - 2.A.38.1.1
Gene ID: HRGMv2_4536_53_99
Type: TC
Location: 118551 - 120326 (+)
Gene ID: HRGMv2_4536_53_100
Type: pfam
Location: 120369 - 121679 (-)
Gene ID: HRGMv2_4536_53_101
Type: pfam
Location: 121793 - 122602 (+)
Gene ID: HRGMv2_4536_53_102
Type: TC
Location: 122688 - 123512 (+)
Gene ID: HRGMv2_4536_53_103
Type: TC
Location: 123535 - 123996 (+)
Gene ID: HRGMv2_4536_53_104
Type: STP
Location: 124233 - 128783 (+)
Gene ID: HRGMv2_4536_53_105
Type: STP
Location: 128798 - 130270 (+)
Gene ID: HRGMv2_4536_53_106
Type: CAZyme
Location: 130338 - 131660 (-)
Gene ID: HRGMv2_4536_53_107
Type:
Location: 131707 - 132246 (-)
Gene ID: HRGMv2_4536_53_108
Type: CAZyme
Location: 132280 - 133035 (-)
Gene ID: HRGMv2_4536_53_109
Type: TC
Location: 133207 - 134673 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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