Cluster: HRGMv2_4536_CGC41
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4536
- CGC Family ID: CGCFAM_01318
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4536_76 | HRGMv2_4536_76_29 | 28377 | 30101 | + | 9.B.33.1.1 |
| TC | HRGMv2_4536_76 | HRGMv2_4536_76_30 | 30085 | 31065 | + | 3.A.1.2.13 |
| pfam | HRGMv2_4536_76 | HRGMv2_4536_76_31 | 31117 | 31689 | - | Flavin_Reduct |
| CAZyme | HRGMv2_4536_76 | HRGMv2_4536_76_32 | 31686 | 32672 | - | GT2 |
Gene ID: HRGMv2_4536_76_29
Type: TC
Location: 28377 - 30101 (+)
Type: TC
Location: 28377 - 30101 (+)
Gene ID: HRGMv2_4536_76_30
Type: TC
Location: 30085 - 31065 (+)
Type: TC
Location: 30085 - 31065 (+)
Gene ID: HRGMv2_4536_76_31
Type: pfam
Location: 31117 - 31689 (-)
Type: pfam
Location: 31117 - 31689 (-)
Gene ID: HRGMv2_4536_76_32
Type: CAZyme
Location: 31686 - 32672 (-)
Type: CAZyme
Location: 31686 - 32672 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.